Detailed information on CNT30697287


BLAST search results

BLAST vs Swiss-Prot:
sp|O23254|GLYC4_ARATH, E-value = 4e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30117918Oryza sativaOryza nivara87.2827.4799.6247forward

Expression of CNT30697287

Peptides detected in this lncRNA

>peptide 1 (31 aa)
SQAKRAKIPENKPLLIRYLPMATALALTCFA*

>peptide 2 (59 aa)
QSSQEGEDPREQALAHKILANGDSVGLDLLCVGLESRCHGLLQSNSKGCNLVVVRTTLQ*

Sequence

>CNT30697287
CCAGTCAAGCCAAGAGGGCGAAGATCCCAGAGAACAAGCCCTTGCTCATAAGATACTTGCCAATGGCGACAGCGTTGGCCTTGACCTGCTTTGCGTAGGC
CTTGAATCCAGGTGTCATGGTTTGCTGCAGAGCAACAGCAAGGGCTGCAATCTGGTGGTTGTGAGGACCACCTTGCAGTGACGGGAACACTGCGAAGTTG
ATCTTGTCCTCGTAGTCATAGACAGCACCCTCAGGCTGGCCCTTCTTGGGAGGCTTAGGGCCCTTCCTGTAGAAGATCATGCC