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Detailed information on CNT30697283


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000299, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30109503Oryza sativaOryza longistaminata49.1610099.51408forward
CNT30104240Oryza sativaOryza rufipogon57.9598.97100481forward

Expression of CNT30697283

Peptides detected in this lncRNA

>peptide 1 (56 aa)
LLRRQEALARQHFHLAAAVIAAAARAFAPRRGLDEGKCLQRHLRRRRGFPSDQRSC*

>peptide 2 (50 aa)
MRGNVSSVISGGDEAFQVINDPASVSSPYVLLYIGIYPFKCHLLQTSVSK*

>peptide 3 (33 aa)
TPPPRGPSKAAFPPRRRRHCRRGAGVCSATRTR*

>peptide 4 (29 aa)
MHFLCTKHYRDACSSNICCLFFSKLFSLI*

Sequence

>CNT30697283
CTACTCCGCCGCCAAGAGGCCCTAGCAAGGCAGCATTTCCACCTCGCCGCCGCCGTCATTGCCGCCGCGGCGCGGGCGTTTGCTCCGCGACGAGGACTCG
ATGAGGGGAAATGTCTCCAGCGTCATCTCCGGCGGCGACGAGGCTTTCCAAGTGATCAACGATCCTGCTAGTGTGAGTTCTCCCTATGTATTACTCTATA
TTGGCATTTATCCTTTTAAGTGCCATCTCCTTCAGACTTCAGTGAGCAAGTAGCATTTTGGTCTTCCTAGCAAGTAGCAACATATCATCACAAAATCAGA
TCTTATGATCTTGTGGTGTTTTTAATTTCTTCTCCTAATTTGTTTAGGAGTCATAAATGCACCAAAGAGAGGATGTTTGTTTCTTTATTTATGACGGAAG
TGACTGAATTAACGGAATAAAACACCATTGTAATAGTCTGGCACTCTGCTGCTGCTAGTACTGCATTTGTGTTACTTAAACTGGTGTCTTCACTTGTGAA
GTTGTCTTCTTTTCTTATGCATTTTCTCTGTACAAAGCATTATAGGGATGCATGTAGCTCCAACATATGTTGCCTTTTCTTCTCTAAGTTGTTTTCTTTA
ATATAGAACAAGAGAAAGAAAAGAAACTTTACAATTCATATCCACATCAAACCTTTTCACCACTTTGAATCTATGGATAAACAGATAGTGCGATGATTGG
GCTTAGGTGGTCCAAGCACTATCCTAGAATTCAATTAGAATAAACATATGATTAATTAGTTGCAGGATCAGTTTCAACAAAGTATCTAACACAGAGCTCC
AGGTACAGCCCACTTATCACCACCTTTTCT