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Detailed information on CNT30697255


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30110391Oryza sativaOryza longistaminata30.1253.9991.63203forward
CNT30104287Oryza sativaOryza rufipogon74.3389.78100501forward

Expression of CNT30697255

Peptides detected in this lncRNA

>peptide 1 (37 aa)
QVDLLPPFLLHLLPLEIGIHTGKRHRRQVQIDISSQS*

>peptide 2 (62 aa)
PKSIFFLLSCCICYPLRLGSTPASATAAKCRSIYHPKARLICLLYRSIDRIPSIPTTTTKCS*

>peptide 3 (69 aa)
MPRLGDPDADLVQRVLCEIGYVCCIHYIGVTSNWYDLLGGGLLVTWNAMFLILDKINSPNARSWRRGRF*

Sequence

>CNT30697255
CCCAAGTCGATCTTCTTCCTCCTTTCTTGCTGCATCTGCTACCCCTTGAGATTGGGATCCACACCGGCAAGCGCCACCGCCGCCAAGTGCAGATCGATAT
ATCATCCCAAAGCTAGGTTAATTTGCCTCCTCTACAGATCGATCGATCGGATCCCCTCGATCCCAACCACCACCACCAAGTGCAGCTAGCGCAGTTCATC
CCCGCCCAAAGGTGCATACTATTATTACAAGGATATGCCTCGATTGGGGGACCCGGATGCAGACCTGGTGCAGAGAGTTCTTTGCGAGATTGGATATGTG
TGTTGCATCCACTATATTGGTGTGACCTCAAACTGGTATGATTTATTAGGAGGCGGCCTTTTGGTGACATGGAATGCGATGTTTTTAATTCTAGACAAGA
TTAACTCGCCCAATGCACGGTCATGGCGTAGAGGAAGATTTTAGATACACGATGATGCATGCAACTCTTAATTGCATGCTCAGTTCAAGTTGACATGTCA
TAATCTTAATATATGCATCATCATATTCTACTGTAGGATGATTCGAAGCTTGTGTATATACAAATGTACTATATATAAGACCTTGATATATTCATAACAA
ATCCTGGTTCAGTCATGTGTATATAATGAAGTTTCAACTCGATCGATTCAATCAATTAATACAGAGAATAATTC