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Detailed information on CNT30697243


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40677|ALFP_ORYSJ, E-value = 8e-113

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677363Oryza sativaSetaria viridis29.2257.490.69376forward
CNT30524148Oryza sativaSetaria italica12.7424.8993.9164forward
CNT30223084Oryza sativaHordeum vulgare12.3520.3888.68159forward
CNT30390900Oryza sativaTriticum turgidum29.6855.289.79382forward
CNT30662744Oryza sativaTriticum dicoccoides12.9831.2789.82167forward
CNT3068263Oryza sativaLeersia perrieri12.7421.5598.17164forward
CNT30367530Oryza sativaSorghum bicolor12.8248.5393.33165forward
CNT30371242Oryza sativaOryza glumipatula24.0947.33100310forward
CNT30150970Oryza sativaBrachypodium distachyon11.6662.2489.33150forward
CNT30582099Oryza sativaEchinochloa crusgalli12.6730.2493.25163forward
CNT30595262Oryza sativaEragrostis curvula12.7422.7193.29164forward
CNT30557232Oryza sativaPanicum hallii12.6724.5192.64163forward

Expression of CNT30697243

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MSTIFLPSTVDWYRVSSKRIAPEMYWSGKPGGWPRCSQGQLTQASYRRSRSTHPWQGYPFLVMQCIPRS*

>peptide 2 (59 aa)
METVTGLGAAAWRVAPHSDFLGRKDDLRRVADAIASGFSEGKGEQGATTLSLTQAFSLQS

>peptide 3 (48 aa)
MYLRNGGVAGKAPGSLLHGEFRWAVGDADNSAPEDEELHVRHWNDIHK*

>peptide 4 (47 aa)
MPSLASAASPSLVYLPSCASELALARRSSASCAAFTFSGCPPHVLRV*

>peptide 5 (45 aa)
MLTVEEDLRLDNRHQPVVLVLFKKIVHACSIIRKEIYYVLAVFVL*

Sequence

>CNT30697243
TTCACTGTCTTGATTGGATTGGATCGGATTAGTAGACGTAGTTCTTGACGAACATGCCCTCCTTGGCCTCGGCGGCCTCGCCGTCGCTGGTGTACTTGCC
GAGCTGCGCCAGCGAGTTGGCCTTGGCGCGGAGGAGCAGCGCGTCCTGCGCCGCCTTCACGTTCTCCGGCTGCCCGCCCCACGTCTTGAGGGTGTAGTCA
GATACTTGCTCAGGGGTGGCCCTGTCCTTGCACTCGGCACCGGGTGTCACCATGCTTGGCTTGAGGAGGATGCCCTCGAACATCACATTGTTCTCGGCCA
TGTAGAAGAAGGTCTCCGCCCACACCTTCTGCGCCACCTCGAAGGTCCTGTCGATGCCATGCTCACCGTCGAGGAGGATCTCAGGCTCGACAATCGGCAC
CAGCCCGTTGTCCTAGTATTATTCAAGAAAATTGTTCATGCTTGCAGCATCATCAGGAAAGAGATTTATTATGTTCTTGCAGTTTTTGTTCTGTAATCAA
GTTTGATATGTACCTGAGAAATGGCGGCGTAGCGGGCAAGGCCCCAGGCAGCCTCCTTCACGGCGAGTTCAGATGGGCCGTTGGGGATGCTGACAACAGT
GCGCCTGAAGATGAAGAACTTCATGTCAGACACTGGAATGATATCCACAAATGATAGTATGTGAAAGGTAACTGGCCATTATATTTGTAGGTGAAAAATT
TGTCTCACCACTTGGCGAAGCGAGCGCCCTGCTGGTAGTATGCCGCCTCGCGCGAGGCAAGGCCGTCGAGACCTTGGCACCATGACTCGTTGGGTCAGTT
TGGAGTGAAATTCATACCTTGTCGACCTTGATACCTGGAACGATTTTCTGCTCAGTGAGGATGTCGACAATCTTCTTGCCATCTACAGTTGACTGGTACA
GAGTCTCCTCGAAGAGGATAGCACCGGAGATGTACTGGTCCGGTAAGCCTGGCGGTTGGCCTCGGTGTTCTCAAGGCCAATTGACGCAAGCCTCTTACCG
CAGGTCGCGTTCGACTCATCCATGGCAAGGATACCCCTTCCTGGTGATGCAATGCATACCGCGGTCTTGACAAGCTCATCGTCGTAGGCACCAGCGCGGA
CAACCATGGAGACAGTCACCGGCTTGGGGGCGGCAGCCTGGCGGGTGGCACCCCATTCAGACTTCTTGGGAAGGAAAGATGACTTGAGGAGAGTAGCAGA
CGCCATTGCTTCCGGTTTCTCTGAAGGCAAAGGAGAGCAAGGTGCTACTACCCTCTCCTTGACACAGGCCTTTTCTTTGCAGTCTTT