Detailed information on CNT30697228


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40677|ALFP_ORYSJ, E-value = 4e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676931Oryza sativaSetaria viridis68.4546.1789.86217forward
CNT30640893Oryza sativaNymphaea colorata34.0711.9686.11108forward
CNT30297329Oryza sativaTriticum aestivum68.7793.5689.91218forward
CNT30390800Oryza sativaTriticum turgidum68.7799.5489.91218forward
CNT30663719Oryza sativaTriticum dicoccoides69.484.2989.55220forward
CNT30263618Oryza sativaBrassica rapa36.9116.6482.05117forward
CNT30557055Oryza sativaPanicum hallii64.9827.5885.44206forward
CNT30724556Oryza sativaLupinus angustifolius41.3213.2783.21131forward

Expression of CNT30697228

Peptides detected in this lncRNA

>peptide 1 (99 aa)
GDPSVEELEGVVRYLLRGGPVLALGTGCHHAWLEEDALEHHIVLGHVEEGPVDAMLTVEEDLRLDNRHQPVVLVLFKKIVHACSIIRKEIYYVLAVFVL*

Sequence

>CNT30697228
GGGGATCCTTCTGTGGAGGAGCTTGAGGGTGTAGTCAGATACTTGCTCAGGGGTGGCCCTGTCCTTGCACTCGGCACCGGGTGTCACCATGCTTGGCTTG
AGGAGGATGCCCTCGAACATCACATTGTTCTCGGCCATGTAGAAGAAGGTCCTGTCGATGCCATGCTCACCGTCGAGGAGGATCTCAGGCTCGACAATCG
GCACCAGCCCGTTGTCCTAGTATTATTCAAGAAAATTGTTCATGCTTGCAGCATCATCAGGAAAGAGATTTATTATGTTCTTGCAGTTTTTGTTCTGTAA
TCAAGTTTGATATGTAC