Detailed information on CNT30697206


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000451, E-value = 1e-131

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30104278Oryza sativaOryza rufipogon46.647.35100349forward

Expression of CNT30697206

Peptides detected in this lncRNA

>peptide 1 (39 aa)
LSLFYHGSHHRLLPISLTGALPAKPSRHRACLDEVNPFF*

>peptide 2 (34 aa)
SLSSTMAATTGYCRSPSPEHCRPNPRATGLASMR*

>peptide 3 (33 aa)
ALSLLPWQPPPAIADLPHRSIAGQTLAPPGLPR*

>peptide 4 (45 aa)
MVQVYSQTLELSHSIASAVLVSHKFVNTHIFCNNISFGALFKCMQ*

>peptide 5 (73 aa)
MRVDGEHVMPPASPCFGHRRAGAPLVLSSPSLAANRRGEERRREEEEGEEKEKERLTESFWSLCRSREFNHIS*

Sequence

>CNT30697206
GCTCTCTCTCTTCTACCATGGCAGCCACCACCGGCTATTGCCGATCTCCCTCACCGGAGCATTGCCGGCCAAACCCTCGCGCCACCGGGCTTGCCTCGAT
GAGGTGAACCCATTTTTCTAGTGTCCATTCTCCCTTAGCCGTCCTATAAGCCACTATAGCCACTTCTTTTACCGGCCGGAGCAAGCTCTTGCCGCCGCCG
TTCCGGCTTCATCTCTCACTTCCACTGCTGACCTCTGCTGTACCCGGATGCGCGTCGACGGGGAACACGTTATGCCACCGGCGTCGCCGTGTTTTGGCCA
CCGGAGGGCCGGCGCCCCGCTCGTCCTCTCTTCTCCCTCTCTCGCTGCCAACAGAAGAGGAGAAGAAAGAAGACGGGAGGAAGAAGAAGGAGAAGAAAAA
GAAAAAGAAAGACTGACAGAGTCATTTTGGAGTTTGTGCCGAAGCCGGGAGTTCAATCATATAAGTTAGTTTCATTTCAACCTAATTCTCAAGTCTAGAT
TAGATAGATGGTACAAGTCTATAGCCAAACATTAGAGTTAAGTCATTCTATAGCTTCTGCTGTATTAGTTAGCCACAAGTTTGTAAATACCCATATATTT
TGTAATAATATATCCTTTGGAGCCTTATTCAAATGTATGCAATGAAGATCCAGATTGTTGAACCTGTATCAATTTACTAATCTAGGGTTTGATACAGTCT
AAACATGTCGGTTTCGGAATCATTAGTTTCGGGACCCGACAACGCCGGC