CANTATAdb - search

Detailed information on CNT30697190

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT001610, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30104170	Oryza sativa	Oryza rufipogon	74.27	30.29	86.45	1166	reverse complement
CNT30578262	Oryza sativa	Oryza barthii	33.44	23.82	94.86	525	reverse complement
CNT30603845	Oryza sativa	Oryza punctata	22.23	89.26	80.52	349	reverse complement

Expression of CNT30697190

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MASRPRRAARAPARFGFKDGRVEPEENHESANEQSHHSNRSHRTVS

Sequence

>CNT30697190
GACTAAGGAGGCGTGGTGAAGTGGAAGCTATTTAGCTATAATCCAACTGTTTATGCGATACCGAGAACCCTGGACAACATCTCTCTCCAAAACAGAGCGA
TCTGCGATCTGGAGTTCACAGGAGTTCTAACGGATCATCTGTATCGGTGGTTCTGGGCATCGTCGATTAGCTGCTAGGTGCAAACTACTGAGTACAGTGA
ACGCCAGCTTCAGTTCCCACGGTTTTGGTGAGGGTCACCACGTCGCTCAGCTTCGTGACCTCTCCCGTTTCCTTGGCTTCTCGTGTCCCGAGTACACGGG
GTACTCCGTGGACCGTGTTCCCCCTCACTGTGAGCTCTCGGTGTACCTTTACCCCCGTGGAGGTATACACGGAGCTGGCCTTCGCCCCCACCACTTCACT
GTGGCCAGGCCCACTCTCCAGATCGCGTACCAGGACCTCTCCTGGACTGCGCTTCGTCGCCTGGCCCACGACTACAGCCACCGTCTCGGAGGTTCCGCCT
TCCGGCAGCTTCCACGCCTTCCCTCTGGCCACTCAGACGCCAGGTACCCTTGTCCGTACAGCGAGTCTCAGCCAGTGCTGACTCGCGTGGTCGAGCTTTC
GGAGGCTCAGGCCACTCAGCACGACCTACTCCTTGAGGCTTACCGCTCCCTTGCCCGCCGCTACGCCGCTTTGGAGGCCCGTCTGGCCGAGGAGGGTGTC
ACCTCAGTTGACACTATCTCTTGGGACTCAGGCCGCCTCTGCCACGCCAGCCACCTGTCCTCCCACAGCTCCCGCGGCTCTGCCCGCACTCCCAGTGGCC
CGCGCTCCCCCAGCTCGCGTGCGCCGTACTCACCAGTGTACTCCCCCTACCCACACCCAGTTAGCCCTTCCTACACCCCCGGACACACCCCAGTTGCTTC
CTCCCGCCGTGGCCCACGCTTTATCCGCACCGCGCGGAAGCGTGTTGTTGGTTCTTCCACCGTGTTCCGTTTCCACTACCCAGCTCCCCCACCGCCAGCG
GCCCGTGCTGCTGCCGGCCCTCGACAGGTTCCGCCAGTCCCTTCGCGTCAGCCGATCGACGTTTCTTCGACTGAGGAGCCGACTACAGGAGGCAGCCAGG
CCGACGAGGAGTAGAGGAGGCAGTCTTCAGCAGCCGTCCGTGTGATAGGCCCTTTTGTTCCGCCGCCAACTCTTTTGGAGTCGTGGCGAGGTAGTGCGTG
CGTGTGTTTGTTGTGGGTGTTGTTTGGTAGTCTGGTTCTCCTAGGTGGTGTGCGCACAGTCAAGCTCGGCGTAGCTCTGTGACTTGTCCACACCCGTTGT
ATCAGGTGTTTTTATGATTTGAAAAATCCAGTTTATGCCTAGTGTGTGCTATCTGAGTTGCTATTTGCTTTGCTCCTTGCCCTCCTAAGTGCTTATCTGA
CTCTTACCCCGCCCTCTTCTGGGAGTTTAGATGGCTAGCCGTCCCCGCCGTGCAGCTCGTGCACCAGCCCGCTTTGGTTTTAAGGATGGTAGAGTTGAGC
CAGAAGAAAATCATGAATCAGCTAATGAGCAGTCTCACCACAGCAACCGTTCGCATCGTACTGTTTCCCG