Detailed information on CNT30697185


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40677|ALFP_ORYSJ, E-value = 3e-58

BLAST vs NONCODE:
NONBRAT002258, E-value = 2e-33

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677073Oryza sativaSetaria viridis51.6813.2690.5200forward
CNT30640852Oryza sativaNymphaea colorata28.4231.784.55110forward
CNT30381337Oryza sativaManihot esculenta50.3916.0980.51195forward
CNT30631336Oryza sativaVigna unguiculata26.8743.8881.73104forward
CNT30586190Oryza sativaMusa acuminata22.4833.7286.2187forward
CNT30261311Oryza sativaBrassica rapa48.8449.6184.13189forward
CNT3017878Oryza sativaZea mays45.2225.3385.14175forward
CNT30683741Oryza sativaTriticum urartu41.8637.4189.51162forward
CNT30479631Oryza sativaArabidopsis halleri33.5918.3482.31130forward
CNT30365623Oryza sativaSorghum bicolor58.9120.4390.35228forward
CNT30355284Oryza sativaLactuca sativa30.4916.7982.2118forward
CNT30117954Oryza sativaOryza nivara41.0911.4999.37159forward
CNT30557185Oryza sativaPanicum hallii64.3439.1581.53249forward
CNT3040010Oryza sativaMarchantia polymorpha31.0126.3781.67120forward

Expression of CNT30697185

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSTIFLPSTVDWYRVSSKRIAPEMYCPKPGAVTRRVR*

>peptide 2 (34 aa)
LTTWRSERPAGSMPPRARQGRRDLGTMTRWVSLE*

Sequence

>CNT30697185
GTCTCACCACTTGGCGAAGCGAGCGCCCTGCTGGTAGTATGCCGCCTCGCGCGAGGCAAGGCCGTCGAGACCTTGGCACCATGACTCGTTGGGTCAGTTT
GGAGTGAAATTCATACCTTGTCGACCTTGATACCTGGAACGATTTTCTGCTCAGTGAGGATGTCGACAATCTTCTTGCCATCTACAGTTGACTGGTACAG
AGTCTCCTCGAAGAGGATAGCACCGGAGATGTACTGTCCCAAGCCCGGTGCGGTGACAAGGAGGGTCCGGTAAGCCTGGCGGTTGGCCTCGGTGTTCTCA
AGGCCAATTGACGCAAGCCTCTTACCGCAGGTCGCGTTCGACTCATCCATGGCAAGGATACCCCTTCCTGGTGATGCAATGGTTTTC