Detailed information on CNT30697150


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555417Oryza sativaOryza glaberrima101.3745.8594.32370forward
CNT30597037Oryza sativaOryza meridionalis65.2145.4292.02238forward
CNT30371316Oryza sativaOryza glumipatula100.2731.0297.27366forward
CNT30103809Oryza sativaOryza rufipogon10050.21100365forward
CNT30578286Oryza sativaOryza barthii101.3738.5494.05370forward
CNT30117950Oryza sativaOryza nivara74.7932.9399.27273forward

Expression of CNT30697150

Peptides detected in this lncRNA

>peptide 1 (58 aa)
LRQTTNLDIKDATKKVHINNTGHSSESYKQTLHNRKANVFQNQTHKLIDRSPHGQIIG*

>peptide 2 (29 aa)
MSMRENTSTTLVELEIMHTALCTLARSPPG

Sequence

>CNT30697150
TTTTACGACAAACCACGAACTTGGATATTAAAGATGCCACAAAGAAGGTTCACATAAACAACACAGGTCACAGCAGCGAAAGCTACAAGCAAACCCTGCA
TAATCGAAAAGCAAATGTTTTTCAAAACCAGACACACAAACTGATAGATAGAAGCCCACACGGACAGATCATAGGATAGCAGCAGTAATCAAGCATTGCC
AAGGCACCAGGCAAGAACCCTGAACCTCTCTAGTACTCGTCACCCTCATCACCCTCGTCACCATCGTCGAACTTGATGTCGATGCGGGAGAACACCTCGA
CGACGCTGGTGGAGTTGGAGATCATGCACACGGCCCTCTGCACCTTGGCCAGGTCTCCCCCCGGG