Detailed information on CNT30697125


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30371296Oryza sativaOryza glumipatula27.954.689.47190reverse complement

Expression of CNT30697125

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MGIPKNLCIFTFSAAFKLFYLAGRPNYYVRPMHR*

>peptide 2 (51 aa)
MRTTYLLIYQVCCMDVITMLWMRVLATDHGTSTVYAPGIREFNPRVPTKDDS

>peptide 3 (65 aa)
MQDVRCLVTITLHRVPEFLRMVLSRVIPSRLPVWFGRWAYRRTYVSLPSPLRLNSFIWPVGLTTM*

>peptide 4 (57 aa)
STPKAEDQNPLIRRERPRHRHAPRRPNRARPPTRTRQVAASDLFAGDLPPPLPSPTA*

>peptide 5 (60 aa)
LHTQSRRPKPSDSPGTPAPSSRPASAEQGATANPHPSSRCLGPLRRRSAATIAVADRLGS*

Sequence

>CNT30697125
CCTCCACACCCAAAGCCGAAGACCAAAACCCTCTGATTCGCCGGGAACGCCCGCGCCATCGTCACGCCCCGCGTCGGCCGAACAGGGCGCGACCGCCAAC
CCGCACCCGTCAAGTCGCTGCCTCGGACCTCTTCGCCGGAGATCTGCCGCCACCATTGCCGTCGCCGACCGCCTAGGGAGCTAGTGGCCACGCCACCTCG
GACCGCCTCCGCCCAAATAGAGCACGGGAGGGCGATTCGATTGTTGCCGTTGGCGAAAGTGTGCAGGACCAAGAGTTATTTGAGGAACCAACTAAGCAAG
ACTTGGATGCAGGATGTGAGGTGTCTAGTGACGATTACTTTGCACCGGGTACCGGAGTTTTTGAGGATGGTTCTTTCTAGGGTGATTCCTAGTCGGTTGC
CTGTGTGGTTTGGTAGATGGGCATACCGAAGAACTTATGTATCTTTACCTTCTCCGCTGCGTTTAAACTCTTTTATTTGGCCGGTCGGCCTAACTACTAT
GTAAGACCTATGCACCGTTAAGTTATGAGAACCACTTATCTACTTATATATCAAGTATGTTGTATGGATGTGATAACAATGTTGTGGATGCGTGTACTAG
CCACTGATCATGGGACTAGTACAGTGTACGCTCCAGGTATTCGGGAATTCAATCCCCGGGTGCCGACAAAAGATGACTCGC