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Detailed information on CNT30697118


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT004321, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30104206Oryza sativaOryza rufipogon63.3577.76100605forward

Expression of CNT30697118

Peptides detected in this lncRNA

>peptide 1 (92 aa)
VRKRKKNKRDAEVTHLLRSKSTAASALPSPPPPLLPFHVAGEVHPRRCFLLSSSGVSSSHSPPPPRLHRTPPTRFLIPIPIPITASEKAGQR*

Sequence

>CNT30697118
GGTACGAAAAAGAAAAAAAAATAAAAGAGACGCAGAAGTAACCCATCTCCTCAGAAGCAAATCCACCGCCGCCTCCGCATTGCCGTCGCCTCCTCCGCCT
CTACTTCCATTCCACGTCGCCGGCGAAGTCCATCCACGCCGTTGCTTTCTCCTCTCCTCCTCCGGCGTCTCTTCCTCGCACAGTCCACCGCCTCCTCGCC
TCCACCGCACCCCTCCTACTCGCTTTCTCATCCCCATCCCCATCCCAATCACAGCTTCAGAAAAAGCGGGACAAAGATAAATCGGATCACAGCTAAATAG
TTTGGAGAATACACTTGGTTTCTTGCCCTGCGTCAGTCTGTTGGGCAAATATGTGAATCAAGGACACAATTAAATTTGAAGATCTACATATCTGCACCGA
TGGTTCAAAAATGGCTGTAAATCAGTAACACTTTTGTCAAAATAATCCTGTTCACTTTAATTTTTTTCCCTTCTGAGTTCTGAAGCTGAAAGCCAAGCAA
ACAGCTCATGGTCACTATATTATTGGTTCTCGTGTCCATGAGGCCTGAGGACACCTTAACCTTAACCTATTAATTAACAACAAAGTTTTAGTTCTACTCT
ACAATTAGCCTATGTAATTAGTACAACACTAGGTACTGAATGCTACAGTTTCTAACTCTGCATTTACCCTATGTAATGTCAATCATATATTGCAGACTGT
TTATGCACATGTCAAGATTATAGCGTGAATTTGACAGCCGAAATGTAAATGACTGCATCTGCCCATCTCTAATTTTTATCTAGAGACTAATATGACAATC
CACTAGCCTACAAAATCTAGGGAGCATTGCACATAAATATATCACCTTTTTCATAGCTAAATGTTTTTTTTTCATATTTGACTGTGTCTACGTGTACTGT
CATCACACCTGCTACAAGTCTGATGACAGATTCATCGATATGAACAAGCTCAAGG