Detailed information on CNT30697110


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30111027Oryza sativaOryza longistaminata94.2782.6598.07362reverse complement
CNT30103845Oryza sativaOryza rufipogon75.7865.2599.66291reverse complement
CNT30578311Oryza sativaOryza barthii74.4863.8497.2286reverse complement

Expression of CNT30697110

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MTSCYILYYDGIGRGMVVRLSGSCKGWYHYLYRLCDKKACRHFACTLCRSGWRWQP*

Sequence

>CNT30697110
AGTTCATTTAGATGATAAGAATTTCAATTTACACAGAAGAGGAGGCATCTTTCAAGTTGTAGATGTGCTATTATTGGTTGTTTAAACTGATTCTTTTGGT
ACCAGGACAATTTTGGCGAGTGAAATCTCTAGCCAGGTCGAGTTAATGACTAGTTGCTATATATTATATTACGATGGGATAGGACGAGGGATGGTTGTTA
GGTTGAGCGGGAGCTGCAAAGGCTGGTACCATTATTTGTATAGGTTGTGTGATAAAAAAGCTTGTAGACATTTTGCATGTACACTTTGCCGTAGTGGTTG
GCGTTGGCAGCCATAAACAGGAACACCATTGTCTGTATGTTACTTGTTTACGGTCTCATGTCCAGCTGTTTGAATTTTGTACCT