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Detailed information on CNT30697041


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006322, E-value = 2e-98

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554279Oryza sativaOryza glaberrima92.1894.0290.75519forward
CNT30109742Oryza sativaOryza longistaminata50.819.9293.01286forward
CNT30103292Oryza sativaOryza rufipogon65.3670.2394.02368forward

Expression of CNT30697041

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MSNLFSSSVRVWRVTTLEELSQIIEGVPNDIDRHGAGVAPLDYTLLLHTNEI*

>peptide 2 (38 aa)
SLAASPSRRRRRLHLCTAAAVRPTPVATAIVSLRRRRF*

>peptide 3 (32 aa)
MVWTVWVISLLSYLTTACRGCSYFQGRLYRNF*

Sequence

>CNT30697041
CATCGCTAGCAGCTAGCCCTAGCCGCCGCCGTCGGCGTCTGCACCTCTGCACCGCCGCTGCTGTGCGTCCGACGCCGGTCGCCACAGCCATCGTCTCCTT
GAGGAGGAGGAGGTTCTGAAGGCACAGGAAAGCAAGAGGGGAAAAGGAGAAAAAAAAGAGGCAAAGTTGGGGATTTTCTGGGATTTCACGAATTGATGTC
GAATTTGTTTTCCTCCTCAGTTAGGGTGTGGAGGGTTACAACGTTGGAGGAGTTGAGTCAGATTATCGAAGGAGTACCTAATGACATTGATCGGCATGGG
GCGGGAGTAGCACCCTTGGACTACACATTATTATTGCACACTAATGAAATTTAGTTTTATACTATGTTTTTGCTCAGCATAAGTTTTGCATAGAACTTGT
AAAGGTCATTTAAAATTCTGGTCCTTATTTTCACGTGGAGTTTTATGGAGCTAGGATGGTTTGGACTGTGTGGGTTATTTCGTTATTGAGTTATCTTACA
ACTGCCTGTCGTGGATGTTCGTATTTTCAAGGGAGACTCTACCGAAATTTCTAATAATTTTGG