CANTATAdb - search

Detailed information on CNT30697012

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30103997	Oryza sativa	Oryza rufipogon	42.54	100	100	228	forward

Expression of CNT30697012

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MDIQSCDVPYMSFESLHLLYWGLICVNSYETILMSNHKPLLSRDELGRDNCRDGVCK*

>peptide 2 (43 aa)
QACNSKFMCIFWVKFDLICYAMGVKCPDTLPVLVPVPQLDLVL*

Sequence

>CNT30697012
CAAGCTTGCAACAGCAAATTTATGTGTATCTTTTGGGTTAAATTTGATTTGATATGCTACGCCATGGGGGTCAAATGTCCTGATACACTCCCAGTCCTTG
TTCCAGTCCCACAGCTTGATCTGGTCTTGTGAGCCTACTGACAGTAGGTAAGGCTCAGTTGGATGGACATCCAAAGTTGTGATGTTCCATACATGAGCTT
TGAATCTCTTCACTTGCTTTACTGGGGACTCATATGTGTAAACTCTTATGAAACCATCTTGATGTCCAACCACAAACCATTGCTTTCGCGCGATGAACTT
GGCCGCGATAACTGTAGAGATGGAGTTTGTAAATAAGTTAGCATTGTTGTGATTTGTGACACTATGTTAAAGACTATGCATGATCAGTAGCAAGTCATGA
AGCATGCCTAGTGGTCCATATGAGCCTTGAATCAGGTTCACTGTTTCCTGTGGACAAATATATGGGGAAAAAATCTTAGTTCTTGAACATACAAAAGCAT
ATTTCAACTTGCTAAAATTTTAAGCATGAGATAACT