Detailed information on CNT30696959


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677027Oryza sativaSetaria viridis65.2251.3788.67150forward
CNT30297575Oryza sativaTriticum aestivum51.351.0888.98118forward
CNT304371Oryza sativaZea mays64.3568.8487.16148forward
CNT30721254Oryza sativaTriticum spelta51.321.1888.98118forward
CNT30344884Oryza sativaEragrostis tef54.3554.3589.6125forward
CNT30365250Oryza sativaSorghum bicolor59.5742.5588.32137forward

Expression of CNT30696959

Peptides detected in this lncRNA

>peptide 1 (33 aa)
YLEKSSGFLLRGRRSSALRWSVPRWRSGRSRRS*

Sequence

>CNT30696959
TACTTGGAGAAGTCCTCTGGCTTCTTGCTGAGAGGGAGACGATCTTCTGCGCTCCGGTGGTCGGTGCCGCGGTGGCGTAGCGGGAGGAGCCGGCGAAGTT
GAGCCGGGTGCCGAGCATCTTGGACGGGGCGAGCGCCGCCATCGCCTCAGGCCCACAATTCAGAGGGAGGTGGGAGATGCAGCAGAAGGGGTGGTGCTGT
GTTCAGAAAGGGGGAGACTGTGGTGGGCGT