| Target | Query species | Target species | Query coverage (%) | Target coverage (%) | Identity | Alignment length (nt) | Orientation |
| CNT30553457 | Oryza sativa | Oryza glaberrima | 31.92 | 18.71 | 96.88 | 128 | forward |
| CNT3067339 | Oryza sativa | Leersia perrieri | 26.68 | 8.87 | 88.79 | 107 | forward |
| CNT30596177 | Oryza sativa | Oryza meridionalis | 72.57 | 46.63 | 92.1 | 291 | forward |
| CNT30370600 | Oryza sativa | Oryza glumipatula | 75.56 | 44.56 | 91.09 | 303 | forward |
| CNT30108388 | Oryza sativa | Oryza longistaminata | 31.92 | 22.34 | 94.53 | 128 | forward |
| CNT30104237 | Oryza sativa | Oryza rufipogon | 73.57 | 100 | 99.66 | 295 | forward |
| CNT30575220 | Oryza sativa | Oryza barthii | 75.31 | 18.78 | 90.07 | 302 | forward |
| CNT30115552 | Oryza sativa | Oryza nivara | 31.17 | 27 | 93.6 | 125 | forward |
| CNT30551189 | Oryza sativa | Oryza brachyantha | 27.68 | 26.49 | 92.79 | 111 | forward |
>CNT30696895
ATGGTTTGATCTTTGATGATTAATTTTCTTTTTTATAGGTGCAAAAATTAGTGGAAACTTGGTTTGTTTCTGCTTATCTTCATTTCAGTTCGTTAACAAC
AGCACATCTCAAGAAGCTATGTATAAGTTGTAGCAAAAAATTCCATTTGCACATCAACAAGAAAGCCTTGCTGTAATTCAATCCTCTACTTGCTATGGGT
GGAGGATGAGAAGCATGGAGTGACTCCATTGAATGTTTGAAAGATTTGTTTTGGTTTTCTGTTTTCAGATTTCGTTATTAGGTTGAATCTGAGATGAACT
ATTGTTTGAATTCTGTTGTATTCTGATTGTATCTGTTATTAGTTGAATCTGAGATAGTATCTGTTATTATGTTTGAATCTGAGATGGTATGAGAAATTGG
A