Detailed information on CNT30696585


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9T0I5|PRP4_ARATH, E-value = 7e-09

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522452Oryza sativaSetaria italica97.0243.4782.59293forward
CNT30179972Oryza sativaSecale cereale68.2128.1484.95206forward
CNT30309159Oryza sativaTriticum aestivum67.5535.7383.33204forward
CNT30220948Oryza sativaHordeum vulgare68.5424.3881.64207forward
CNT30437233Oryza sativaAegilops tauschii62.2524.8781.38188forward
CNT30252009Oryza sativaAvena sativa62.2518.9585.64188forward
CNT30659258Oryza sativaTriticum dicoccoides46.6966.5186.52141forward
CNT30132649Oryza sativaLolium perenne58.9411.880.9178forward
CNT30110Oryza sativaZea mays35.7613.8881.48108forward
CNT30109906Oryza sativaOryza longistaminata84.7735.3197.66256forward
CNT30551666Oryza sativaOryza brachyantha77.1525.3591.42233forward

Expression of CNT30696585

Peptides detected in this lncRNA

>peptide 1 (99 aa)
EVVEEVLLDGLADGRRRAHRRHIVGLAGDGDEGALRHWHDLGWLLAGAWLVGGAVELSDAVGAVEVGVKGDAEGTGAVELSSGLALVLAVAVLALNRHLE

>peptide 2 (41 aa)
MQSELWRSASRGTLKAPVPSSFPVALLSYSPLPFLHLIATWR

>peptide 3 (30 aa)
MAPGRGMARWWRCGAERCSRSCGGRRQGGR*

Sequence

>CNT30696585
GAAGTGGTCGAAGAAGTGCTTCTTGATGGGCTCGCAGATGGTCGCCGACGCGCACACCGGCGACACATAGTGGGTCTTGCCGGCGACGGCGACGAAGGTG
CCCTCCGACATTGGCACGATCTTGGATGGCTCCTGGCCGGGGCATGGCTCGTTGGTGGCGCTGTGGAGCTGAGCGATGCAGTCGGAGCTGTGGAGGTCGG
CGTCAAGGGGGACGCTGAAGGCACCGGTGCCGTCGAGCTTTCCAGTGGCCTTGCTCTCGTACTCGCCGTTGCCGTTCTTGCACTTAATCGCCACCTGGAG
GT