Detailed information on CNT30696570


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000202, E-value = 1e-169

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30102900Oryza sativaOryza rufipogon60.5779.6796.88192reverse complement

Expression of CNT30696570

Peptides detected in this lncRNA

>peptide 1 (90 aa)
GSLSSGSSSSSSSLMMSMTGSARSGTASPITRIFEANWRRGGGQVLFLAVRRSLDVGGGISPLSSANSFCRRCTLLFNLQILPRFQFSRS*

>peptide 2 (35 aa)
LSFFRIFLLFLITYDVDDRFSTIGHSFTHHANLRS*

Sequence

>CNT30696570
GGCTCTCTTTCTTCAGGATCTTCCTCCTCTTCCTCATCACTTATGATGTCGATGACAGGTTCAGCACGATCGGGCACAGCTTCACCCATCACGCGAATCT
TCGAAGCTAACTGGAGACGAGGTGGCGGACAGGTTCTCTTTCTTGCAGTGAGGCGAAGCTTGGATGTTGGCGGCGGCATTTCTCCTTTAAGTTCAGCTAA
TTCCTTCTGTAGACGGTGCACCTTGCTCTTCAACTTGCAAATCTTGCCTCGATTCCAGTTTTCCCGGTCATGAGCTGCTTTGTCTCGCTCCACACTTACT
GCATCCATAGCACTAAG