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Detailed information on CNT30696568


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01595|CCDP_MAIZE, E-value = 7e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555088Oryza sativaOryza glaberrima50.6652.5799.29420forward
CNT30664801Oryza sativaTriticum dicoccoides10.4927.887.3687forward
CNT30348037Oryza sativaEragrostis tef27.2645.2988.05226forward
CNT30596933Oryza sativaOryza meridionalis47.0436.7294.1390forward
CNT30371173Oryza sativaOryza glumipatula92.5297.2198.96767forward
CNT30103575Oryza sativaOryza rufipogon53.862.55100446forward
CNT30583731Oryza sativaEchinochloa crusgalli17.2522.6388.81143forward

Expression of CNT30696568

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MRLRSMGMLSLMPSTLALTAVQRQTAASRSTRPSSSEQQGSYGDTAPTLALTRPSTLAHTCSFSASRGHDDPPP*

Sequence

>CNT30696568
GGTACCTATGTAGAGTTCATATCCAAATTCCAGAGCTCCAAATTTACAAAAGAAAATACTAATTGCAACTTCGATTGACATCTGAACCATAACAGATCAT
AAGCACAAAAAATACATATATATTGACCAGTAAACTGATCACCCGGGGTCACAACCAACACTTACACATGTAATAATACATACTGGCCAATGGTTTTTTC
CCAGAACTAATTAAACTTTGCAAGCATAAACAAAGACAAAACAGACAGTTTCCAAAGTTCAGAGAGTTCAGACTGCTCACAGTAAACCAACCAACAAAAA
CATGTAGACGACGTGTAGCACACTGTCAATCGATCGATCGATCGATCGGCTGCAGTGTCCCAATGTGATTAAGCACACTGGTAGTCGGATGGGCAGATCT
TGCCGCAGTTGTTGAGGATGAGGCTGAGGTCGATGGGGATGTTGAGCTTGATGCCGAGCACGTTGGCCTTGACGGCGGTGCAGAGGCAGACGGCGGCGTC
GAGGTCGACGAGGCCGTCGAGCAGCGAGCAGCAGGGCTCGTACGGCGACACGGCGCCGACCTTGGCCTTGACGAGGCCCAGCACGTTGGCGCACACGTGC
AGCTTCAGCGCGTCGCGCGGGCACGACGACCCGCCGCCGTAGTGAGGCGTCGGCGGCTTCGGCCTCGGCGCCGGTGGCTTCGGCGAAGGGCAGTCCGGGC
AGGCCACGGCCATGGCCACCACCAGGAGGCTCACCGCCAGCACAAGCGCCGCCTTCGCCGCCATTGCTGCAACTAATCGAGCTAGTGTAGCTAGCTAGTA
GCTCGAGCTTGCTGCTGCTTGGTTGCTGT