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Detailed information on CNT30696498


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555247Oryza sativaOryza glaberrima93.3887.998.99494forward
CNT30102853Oryza sativaOryza rufipogon45.1859.7585.77239forward

Expression of CNT30696498

Peptides detected in this lncRNA

>peptide 1 (35 aa)
FFLPCLFSHELSSLLIFSFPNLLENARIKPCMSHH*

Sequence

>CNT30696498
TTCTTCCTCCCTTGTCTGTTCTCCCATGAGCTGAGCTCTCTCCTAATTTTCTCCTTCCCGAATCTTCTTGAAAATGCAAGAATCAAGCCCTGCATGTCAC
ACCACTAGATCCTTGTGATTCTAAGCTTTCCATCCATCCAAATGGCTTGCACATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGC
TGCTTGGTGCAGTAGCAGTAACACTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACA
GCAGCAAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGATT
GGTTGCCCTTGTGGGGTTGTTGGCACACCACAGGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATGATGGGCTT
GTGAACCCCGTTATGAAATATGTACCTTG