CANTATAdb - search

Detailed information on CNT30696475

BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 4e-57

BLAST vs NONCODE:
NONBNAT004661, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30677010	Oryza sativa	Setaria viridis	33.24	91.51	93.89	851	forward
CNT30524664	Oryza sativa	Setaria italica	54.06	101.1	98.48	1384	forward
CNT30639555	Oryza sativa	Nymphaea colorata	36.48	54.68	95.4	934	forward
CNT30536068	Oryza sativa	Eucalyptus grandis	40.16	29.85	93.58	1028	reverse complement
CNT30513456	Oryza sativa	Juglans regia	40.16	32.39	94.65	1028	forward
CNT30500477	Oryza sativa	Coffea canephora	40.16	56.45	94.75	1028	forward
CNT30269781	Oryza sativa	Chenopodium quinoa	40.08	34.72	93.57	1026	forward
CNT30730500	Oryza sativa	Corchorus capsularis	40.16	86.6	95.62	1028	forward
CNT30630109	Oryza sativa	Vigna unguiculata	40.16	32.61	94.65	1028	forward
CNT30196411	Oryza sativa	Pisum sativum	38.98	78.89	92.79	998	forward
CNT30503431	Oryza sativa	Nicotiana attenuata	23.63	43.81	96.69	605	reverse complement
CNT30638683	Oryza sativa	Capsicum annuum	19.96	99.03	90.41	511	reverse complement
CNT3090649	Oryza sativa	Solanum tuberosum	40.16	37.6	95.04	1028	forward
CNT30186247	Oryza sativa	Secale cereale	49.8	89.66	99.29	1275	forward
CNT30291213	Oryza sativa	Triticum aestivum	69.53	51.24	98.99	1780	forward
CNT30225309	Oryza sativa	Hordeum vulgare	41.33	87.8	95.27	1058	forward
CNT30400299	Oryza sativa	Triticum turgidum	70.23	84.29	99.28	1798	forward
CNT30511396	Oryza sativa	Solanum lycopersicum	15.51	43.39	92.7	397	forward
CNT30552690	Oryza sativa	Oryza glaberrima	19.1	31.94	98.16	489	forward
CNT30444225	Oryza sativa	Aegilops tauschii	43.12	100	98.73	1104	forward
CNT30248027	Oryza sativa	Avena sativa	36.99	97.23	97.36	947	reverse complement
CNT30668159	Oryza sativa	Triticum dicoccoides	27.89	100	95.52	714	forward
CNT30310298	Oryza sativa	Camelina sativa	39.92	67.02	95.3	1022	reverse complement
CNT3062651	Oryza sativa	Arabidopsis lyrata	26.91	82.81	95.94	689	reverse complement
CNT30460950	Oryza sativa	Saccharum spontaneum	78.16	67.46	99.05	2001	forward
CNT30136065	Oryza sativa	Lolium perenne	25.2	100.47	97.83	645	forward
CNT3018333	Oryza sativa	Zea mays	78.16	70.09	99.55	2001	forward
CNT30655263	Oryza sativa	Rosa chinensis	38.79	55.01	92.04	993	forward
CNT30206724	Oryza sativa	Helianthus annuus	38.28	45.16	96.02	980	forward
CNT30713553	Oryza sativa	Malus domestica golden	20.31	77.15	93.46	520	forward
CNT30689044	Oryza sativa	Triticum urartu	64.96	61.68	98.92	1663	forward
CNT30722943	Oryza sativa	Triticum spelta	37.27	47.39	99.48	954	forward
CNT30364730	Oryza sativa	Sorghum bicolor	15.59	70.37	98.5	399	reverse complement
CNT30596725	Oryza sativa	Oryza meridionalis	59.34	44.02	99.74	1519	forward
CNT30357533	Oryza sativa	Lactuca sativa	13.75	34.58	95.45	352	forward
CNT30154922	Oryza sativa	Prunus persica	40.16	60.86	91.44	1028	reverse complement
CNT30411255	Oryza sativa	Papaver somniferum	40.16	33.86	94.65	1028	reverse complement
CNT30646402	Oryza sativa	Cannabis sativa	35.7	72.25	91.25	914	reverse complement
CNT30319706	Oryza sativa	Asparagus officinalis	40.35	35.94	95.93	1033	forward
CNT30332807	Oryza sativa	Dioscorea rotundata	39.65	61.44	95.96	1015	reverse complement
CNT30148090	Oryza sativa	Brachypodium distachyon	44.65	39.35	99.39	1143	reverse complement
CNT30102929	Oryza sativa	Oryza rufipogon	40.86	68.73	97.71	1046	reverse complement
CNT30576679	Oryza sativa	Oryza barthii	13.91	67.81	98.03	356	forward
CNT30585638	Oryza sativa	Echinochloa crusgalli	30.7	50.78	99.49	786	reverse complement
CNT30604668	Oryza sativa	Oryza punctata	16.84	98.18	96.29	431	forward

Expression of CNT30696475

Peptides detected in this lncRNA

>peptide 1 (89 aa)
FAFMDVDKILPFSSTLGWHSLNVNGEVQKRKGLRWIPRYPETRKGVASDEMLRGVENKHRSGDSQIGQPFELPAESMSRQETTWRTETS*

>peptide 2 (35 aa)
MPRAEVRVPSAAALKYEPRGLAIASPRGSYQALRR*

>peptide 3 (38 aa)
MSRRLIGSGLVKGTEPTGAVAKASLHRAIVTAYGPEPG*

>peptide 4 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

>peptide 5 (32 aa)
MSKCIGRRAFRLRGKQPRKRGSTKRKRECRLE*

>peptide 6 (68 aa)
MNGAKRSAEAVGCQNASVGERSALEGSNRESGGRRSGSENVGLSNENIGENPMPRKPKVSSARFVHRG*

>peptide 7 (79 aa)
MSVKMRTTCTWTERPYEALLFPVIGFGPFLRSLGGRRRRPPSGGARAISEIPLWKSSDSNLVSDPRAKGQSQVDSFYGA*

>peptide 8 (48 aa)
MGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA*

>peptide 9 (59 aa)
MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGCASGTKSRQTLNTRYDPKITGVKVGQ*

Sequence

>CNT30696475
TTTCGCATTCATGGACGTTGATAAGATCCTTCCATTTAGTAGCACCTTAGGATGGCATAGCCTTAACGTTAATGGCGAGGTTCAAAAGAGGAAAGGCTTG
CGGTGGATACCTAGGTACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCAAATAG
GTCAACCTTTTGAACTGCCTGCTGAATCCATGAGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGAT
TCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTTGTGCTGCTAGGCGAAGCGGTTGAG
TGCCGCACCCTAGATGGCTAAAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGC
AAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGCGAAGTAGTACCGTGAGGGAAAGTGATCTCTGACCGCGTGCCTGTTGAAGAATGAGC
CGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCG
AACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGATGAAACTAAGCAGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTA
GGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAGCACTGTTTCGG
TGCGGGCTGCGCGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCAAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGA
TAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTGGGGGTGCAAAGACAGCCAGGA
GGTTTGCCTAGAAGCAGCCACCCTTTAAAGAGTGCGTAATAGCTCACTGATCGAGCGCCCTTGCGCTGAAGATGAACGGGGCTAAGCGATCTGCCGAAGC
TGTGGGATGTCAAAATGCATCGGTAGGAGAGCGTTCCGCCTTAGAGGGAAGCAACCGCGAAAGCGGGGGTCGACGAAGCGGAAGCGAGAATGTCGGCTTG
AGTAACGAAAACATTGGTGAGAATCCAATGCCCCGAAAACCCAAGGTTTCCTCCGCAAGGTTCGTCCACAGAGGGTGAGTCAGGGCCTAAGATCAGGCCG
AAAGGCGTAGTCGATGGACAACAGGTCAATATTCCTGTACTACCCCTTGTTGGTACGGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATAGGT
TTAAGGACACAAGGTGACCCTGCTTTTTCAGGGTAAGAAGGGGTAGAGAAAATGCCTCGAGCCGAGGTCCGAGTACCAAGCGCTGCAGCGCTGAAGTATG
AGCCCCGTGGACTAGCCATTGCTTCTCCACGAGGCTCATACCAGGCGCTACGGCGCTGAAGTATGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACG
ACCTTCAACAAAGGGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAA
TAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCGCAAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAG
TCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTGGTGAACTGATGACAGGGAAGCCGGCGACCGAAGCCCCGGTGA
ACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAG
AGAGACTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTTACTGTTCCCTGTGATTGGCTTTGG
GCCTTTCCTGCGCAGCTTAGGTGGAAGGCGAAGAAGGCCCCCTTCCGGGGGGGCCCGAGCCATCAGTGAGATACCACTCTGGAAGAGCTCGGATTCTAAC
CTTGTGTCAGACCCGCGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCG
GGCCAGACGGACATTGGTCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACTCACCCGTCGAGCAGAGACGAAAGTCGGCCTTAGTGATCCGAC
GGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTG