CANTATAdb - search

Detailed information on CNT30696384

BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 2e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30555190	Oryza sativa	Oryza glaberrima	99.4	76.65	99.4	499	forward
CNT30103740	Oryza sativa	Oryza rufipogon	96.41	82.31	99.59	484	forward

Expression of CNT30696384

Peptides detected in this lncRNA

>peptide 1 (45 aa)
SATNGSRTIESKEKKSKKLTTHQDIGGKNNMKIRYSQPWSDQVQH*

>peptide 2 (33 aa)
MRLRSMGRLSLMPSTLAHTCSFSASRGHDDPPP*

Sequence

>CNT30696384
AGCGCTACCAACGGATCACGAACCATAGAATCAAAAGAAAAAAAAAGCAAGAAATTAACAACACATCAAGATATTGGGGGTAAAAACAACATGAAGATAC
GGTACTCCCAGCCATGGAGTGATCAAGTGCAACACTAGCTCTCTAGATCTCGATCTAGTGCACGCACTGGTAGTCGGATGGGCAGATCTTGCCGCAGTTG
TTGAGGATGAGGCTGAGGTCGATGGGGAGGTTGAGCTTGATGCCCAGCACGTTGGCGCACACGTGCAGCTTCAGCGCGTCGCGCGGGCACGACGACCCGC
CGCCGTAGTGAGGCGTCGGCGGCTTCGGCCTCGGCGCCGGTGGCTTCGGCGAAGGGCAGTCCGGGCAGGCCACGGCCATGGCCACCACCAGGAGGCTCAC
CGCCAGCACAAGCGCCGCCTTCGCCGCCATTGCTGCAACTAATCGAGCTAGTGTAGCTAGCTAGTAGCTCGAGCTTGCTGCTGCTTGGTTGCTGTGGTTG
GG