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Detailed information on CNT30696308


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595455Oryza sativaOryza meridionalis29.739.0294.6352forward

Expression of CNT30696308

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MYLYTCYSSNPTDSVLLYEELNTLLLFWTLIQWFSRWNCDFSSLS*

Sequence

>CNT30696308
AATTTTCTACATGCCACTATACTAGCACAATCAGATCCTTATATCCTTATGCTGAGTAGTAATTCAGAGAATTAATTTGAATTCCTGCATACCAAATGCA
TCATAGTAATATGACTAAAATGATCACATGACCTAAAAACTATGCATCTTGATTTTGTTGTCAAATATACTGACTACTAAAATAACTGGTAATTAATTGT
GTTCTATGTTATTGGTCTTAGCAAAGTTATGCTGATCAACTACTAAGGTTCAGATCCTAATGTTATGCTCTTCTAGGACTTATGATTAGGACTCATAGAT
TTCTGTTTATGGATCTACATTTATACTAAAGATGTACTTGTACACTTGCTATTCATCCAATCCTACAGATTCGGTATTACTATATGAAGAACTAAATACA
TTGCTACTCTTCTGGACTCTGATTCAATGGTTCTCCCGATGGAACTGTGATTTCTCCTCTTTGAGCTGAAGCACCACCTGCTCCTCCAGAAACTGAAACC
CCTCTCTTCTTGAAGCTCAGGACTGAACACCTCTACTTCATCCAAGAACTAAATACCTTTGCTTCTCCTTCTTCAGATTTGGTTTCTCTCTCTCTCTTTC
TTGTTGTTTCCCTGTGGATAATAGGAATGAGATACGGTGTAATTGTGTTGCTGGCTACTAAGCTACTGCTCTGCTATTTTTCTCTGTTTTGAGCTGGTTT
TACAACCGAACTGCTGGCTGCTACTACTGCTGCGGCTGAGGATGCTGCTTGGGGTTGTTTTCCAGCCGATGCAACCGAGACTGATTCACAGATAGCTGGT
TAATATATGTGTGAATTTTTTTTGTGAAGGCTGGGTGACTCACCTACTTTAGTTTTGGTGGTTGTTTCACTGACTGACACCTAAGCAGTGTTTGATCGGT
GGTGTAATGTGGGATTTCACTAAATTTTTCTATTTAGATAAATTCTGATACAATTAGGTACTTTTGCACTTGAGTCCCTCGGGGTCTCTAAAATTGAAGG
TTACTCTGAGATTAGGGACTAATTTATAATTGTTCTAGAACTCATAGTCATTTTTGCAAGGTTACCAATTCTCCATATATTTTTGGTAGATAAATTTATG
CTTCTATATGATGTAGCCGTGCATCTATTTGCTTGCTGGGATTAAAATGATTTGCTCTAGTTTTATTTTCAATTTCACAATTCCT