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Detailed information on CNT30696307


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT000867, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596232Oryza sativaOryza meridionalis65.2158.0594.65523forward
CNT30103529Oryza sativaOryza rufipogon65.2170.9699.24523forward

Expression of CNT30696307

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MSVFLGETLPKFLIILGLSFRVYLYFGVAF*

>peptide 2 (74 aa)
KKTNEKKEKQEKRPCSPSRRTSCALLPPLLFLSSPAPPLVQPPPVATAVVVHSRSLEGGREGRDEQEGRKEGEI*

>peptide 3 (95 aa)
KKRTKKKRNRRNAPVALAAAPPALCCRRCCSCLRRRRRWCSRRRSPQPSSSTAGRWKEGEKAETNRKEGKKGKFDRRREIWGIWYLMTLIGMGRE*

Sequence

>CNT30696307
AAAAAAAACGAACGAAAAAAAAGAGAAACAGGAGAAACGCCCCTGTAGCCCTAGCCGCCGCACCTCCTGCGCTCTGCTGCCGCCGCTGCTGTTCCTGTCT
TCGCCGGCGCCGCCGCTGGTGCAGCCGCCGCCGGTCGCCACAGCCGTCGTCGTCCACAGCCGGTCGTTGGAAGGAGGGAGAGAAGGCAGAGACGAACAGG
AAGGAAGGAAAGAAGGGGAAATTTGATAGAAGAAGGGAAATTTGGGGAATTTGGTACCTAATGACATTGATCGGCATGGGGCGGGAGTAGCACCCTTGGA
CTACACATTATTATTGCACACAACTGAAATTTAGTTTTAGACTATTTTTTTGCTCAGCATAAGTTTTGCATAGAACTTATAAAGGTCATTTAAGGTTCTG
ATCCTTATTTTTCACGTGGGATTTGTGGAGCTAGGATGGTTTGGATTGTGTGGATTATATCGGTATTGACCTTTCTTATCACTGCCTGTCGTGGATGTCT
GTATTTTTAGGGGAGACTCTGCCAAAATTTCTAATAATTTTGGGACTTAGTTTTCGAGTGTATTTGTATTTTGGTGTGGCATTCTAGGTACGTGGTTACC
TGGGGTGTTATAGGGCAGGCTTCACTCAAGGTGGAAAAAAAATGAAAACAGTAAATGTGTATTAATAATGAAAAATTGGATCCCCTATTACACACCCCTC
GGGGTCTTTTTATAGTTTTACGACCCTAGAGTTTGGCGTGCTAGTGAATTTATATGATTGTCTCTTTGATGGAACAATTATGAGGGATACTGTAAATAAC
GT