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Detailed information on CNT30696298


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT007251, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555578Oryza sativaOryza glaberrima24.7432.8295.56428reverse complement
CNT30117298Oryza sativaOryza nivara10.6983.3387.03185forward

Expression of CNT30696298

Peptides detected in this lncRNA

>peptide 1 (81 aa)
MWAVRPAGSESKSVFVGSQVSLLGKTCFVFPLVSIPSWTWRRACRGQNQPLFKGQGRFIVKPPNRIYLNRSFTMFFYFTPV*

>peptide 2 (32 aa)
MDEIEENCQSLESTGFPSRGRSDRWYMGGLTG*

>peptide 3 (48 aa)
MYKRKDKFYSGSRSSRINLDLSYFLIRWTISIYTTTLTTSSRTYKSMS*

>peptide 4 (33 aa)
MQSIQLRSMYKAKYIISPLCSTTPFQNISQLYW*

Sequence

>CNT30696298
TAGCAATTAAAGCAAGGTTTCAGTTTTGCATTATTATATAAATAAAGGTTCATTACGATTTATCACATCTTATTAATTAAAAAAAATAGCACATCTTACC
TCACTACACAACTGTGTCCTTGGAGATTCCAAATGTATAAAAGAAAAGACAAGTTTTACAGCGGATCTAGGAGTAGCAGAATCAATCTAGACCTTTCATA
TTTTCTCATCCGATGGACTATATCTATTTATACTACCACCTTAACCACTAGCAGTAGAACTTATAAATCAATGTCTTAGATTTATACTACTAAAGGAGAT
CACTGTAAAAGCCCTTAAAAAAAAGGCATCTGCTTGGTCAATCTTACATGTTTCAGATAGCATAAAAAGACTCCGACATCTCGTGCAAAAATTGAACTTA
CTGTTTACACCCAAATTTGGCACCTATGGACGAAATAGAGGAAAATTGCCAAAGTTTGGAAAGTACCGGGTTTCCTTCACGGGGCCGGTCAGACCGCTGG
TATATGGGCGGTCTGACCGGCTAGTAGGGCCGGTCTGACCACAGGTATGTGGGCGGTCAGACCAGCAGGGTCTGAGTCCAAGTCTGTTTTCGTCGGGTCT
CAGGTTTCCTTGCTCGGGAAGACATGTTTTGTGTTTCCATTGGTTTCTATCCCGAGTTGGACATGGAGGAGGGCCTGTAGAGGGCAAAACCAACCCCTAT
TTAAGGGACAAGGCCGGTTCATTGTAAAACCCCCAAATAGAATTTACTTGAATCGTTCTTTTACTATGTTTTTCTATTTTACCCCAGTTTAGTCCATCTT
CGTCGGTTTGCGCCGTAAACCGTCCGCCGCCACTGCGAGAGTGCGACATCTCTTTGTAGGTTTGTCCTGAAAACCTTCCGTTTTGCCCACGAGACGGGTA
GTTATCCTCATATCGATCTAAATCGGCCTAGAGGCTGATTTTGATCTCTAAATCGGCTCCGCTAGCCGGTTTAGCTGTTTTTCCTCAAAACCCATCTTGA
TTTGGCCGTTTGGCTAGATTGAGATGGTTGGCGACTCCATACGACCGCAAGGCGTTTAGGTGTTGCGATCGTGCTTGTCGACTTGTCAAAAAAGTTGCCA
ACACTTACCAATGTGGTGAAAACAACTGGAAGAAAAAAAAACAATGCAGAGCATCCAGCTAAGATCGATGTATAAAGCAAAATATATCATTAGTCCCTTA
TGTTCTACTACTCCATTTCAGAACATTAGCCAGCTTTATTGGTAAGTTCAATTTCAGAACATAAAGTCGACAGATAGCATCGAGAGTATCATCACATTTT
TACCTATGAGCTCATCCTATATACAAGATGCTATTATAAAAGTCGGTGCACTGTGTTAGCTTACTAGATTCCAATATAACATAGAACAATAAAATCAACG
GAGGAAAGAAAGGCAAGCAGTGAGACACAATACTTGTGCAGACGAAAACAGCCAGCCACAATAAAACAGTCCATGGCATATTCATATTATAAATTATAGT
ATTATACTAGCAGGAATCAGCTGGAAGCTATGAAAATAGGAGCTGCTACATAAAACAGGACTAGCTTGGTCCCCGGACAAATTTAGGAATTAGCTTTAGC
TCTTACTGAAAAGGTAACAGCATGAATGAATGAATGAATGAGTTCTAGGGGGCTAGACTGCTAGGGTTACACACACAGTTCAAATTACAGCTAAACAGAG
GCAGGAATTTTGGCACGAAGCAGTTCATAG