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Detailed information on CNT30696255


BLAST search results

BLAST vs Swiss-Prot:
sp|P12330|CB21_ORYSJ, E-value = 5e-122

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30393445Oryza sativaTriticum turgidum55.1459.6487.79467forward
CNT30250793Oryza sativaAvena sativa70.658.6389.13598forward

Expression of CNT30696255

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MAWTKKPNMENMARRPFLISFTLSSANASGSSARPSGSKAPPG*

Sequence

>CNT30696255
ATCTAATAGAGATGAGAAATCCGCTAATCAGAATAACACCACGGATAAGTACCTAGACCATTAGTTGGGAAACGAATAAAATCATTATTGCAAAAACATC
ATCTTCTTCTTCATCTTCTTAGTGTACACAACACCAACTCGATCATCATCTCGTCGCACTAAACCCATCTTCCCCAACCCAAAGACAACGAACTCGCTGG
CCACAAATCCATCCAACCACAATTAACCACTGCTAAGCTACGGTCCCCCACTTCACTTGCCGGGGACGAAGTTGGTGGCGTACGCCCAGGCGTTGTTGTT
GACGGGGTCGGCGAGGTGGTCGGCGAGGTTCTCGAGGGGGCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGG
CCGTTCTTGATCTCCTTCACCTTGAGCTCCGCGAACGCCTCGGGGTCATCGGCGAGGCCGAGCGGGTCGAAGGCGCCGCCGGGGTAGAGCGGGTAGTCGA
GCCCGCCCTCGCTGAAGATCTGCGAGCCCGCCTTGAACCACACGGCCTCGCCGAACTTGACGCCGTTCCGGGCGAGGAGCTCCGGGAAGACGCAGCCGAG
CGCGCCCAGCATCGCCCACCGGGAGTGGATCACCTCCAGCTCCCGGTTCTTGGCGAACGTCTCCGGGTCGGCGGAGAGCCCCGCGGTGTCCCACCCGTAG
TCGCCCGGGAACTCGCCGGTGAGGTAGCTCGGCGGCTCGCCGGAGAGCGGGCCGAGGTAGAGGACGCGGTCGGCGCCGTACCACGGGCTCCCCGACGACG
CCGCCGGCTTGGGCTTCGCGGCGGTCTTGCGCATGGTGATCCGCGCC