Detailed information on CNT3069623


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516347Quercus suberJuglans regia34.2122.2988.46156forward
CNT30488958Quercus suberOlea europaea26.122.6784.03119forward
CNT30415826Quercus suberPapaver somniferum21.9314.6282100forward
CNT30120561Quercus suberCitrus clementina44.9636.1684.39205forward
CNT30174921Quercus suberVigna angularis20.1818.8585.8792forward
CNT30724806Quercus suberLupinus angustifolius20.3911.183.8793forward

Expression of CNT3069623

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MVMMGLERLMVTLKSKIRSLKMKKPYDKIEKSESMRIEIRSRKAQKLIQKNLKIADSPKTKAIVF*

Sequence

>CNT3069623
ATGCTTACATTGTGACGTCCAACTACTGCTACATTCATAAAAATTCTCTCTCTCACTTGCTTTTCCCAAACCCTCTCTAACTTTCTGGTTTCTCTCCTCT
TCTCTTCTCTTCCGCTCTAAGCAGGTTTAGCTATATAGCCATGGTAATGATGGGCTTGGAAAGGTTGATGGTGACTTTGAAATCTAAAATAAGGTCCTTG
AAGATGAAGAAACCGTATGACAAGATCGAAAAGAGTGAAAGCATGAGAATTGAGATCAGAAGCAGGAAGGCTCAGAAGCTTATTCAAAAGAACCTCAAAA
TTGCGGATTCACCCAAGACCAAAGCTATTGTTTTCTGACTTCTGAGTGTTTCTCATCTAATGATAAGAGACCATAAATAACAGGCTGGTTAATTTCTGTT
TTTGATGTTAACCATTGTAGTTTTATACAAGATGGTATAAGTATCTCTCTTTTTTT