Detailed information on CNT30696207


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30108987Oryza sativaOryza longistaminata65.119.899.01304reverse complement
CNT30103386Oryza sativaOryza rufipogon65.115.84100304forward

Expression of CNT30696207

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGTTPPPTVSTLIRETSLLVRSSSYLLRQ*

>peptide 2 (35 aa)
MPRRRRWRSFQEDMVAKLGELLGGWGRRLLPQSPR*

>peptide 3 (44 aa)
ESLLCGTSKKKHCTSYATSNQKIMKHPNNQSATNIHTKLQQTES*

Sequence

>CNT30696207
CGAGAGCCTGTTGTGTGGAACATCAAAGAAAAAACATTGCACATCTTATGCAACATCTAACCAAAAGATAATGAAACACCCAAATAATCAAAGTGCAACA
AACATACACACCAAACTGCAACAAACCGAGAGTTGAGCCCTGAGCACGGAGCAACAACACATGCCTAGGAGGAGACGATGGCGAAGCTTTCAAGAGGACA
TGGTGGCCAAGCTCGGTGAGCTCCTTGGTGGATGGGGACGACGCCTCCTCCCACAGTCTCCACGCTAATCAGGGAGACGTCGTTGCTGGTAAGGTCGTCG
TCGTATCTTCTCCGTCAATAGTGAGGTTGTACGGAGAGAGAAGGTAGGAAGTTGGGGGAGAGAGAGAGAGAAATTGGGAAGTTGAAGGGATAAGGATAAC
ATGTGGCTGGTGGTTGGTGGAGTTGAAAGAGAACGAGTGGATAGAAGCGATGGTAGGCCGATTTTTT