Detailed information on CNT30696190


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30396291Oryza sativaTriticum turgidum75.6279.7492.51307reverse complement
CNT30344054Oryza sativaEragrostis tef54.1940.2287.73220reverse complement
CNT30705533Oryza sativaPrunus avium28.0813.2683.33114reverse complement
CNT30150293Oryza sativaBrachypodium distachyon47.2911.3989.58192reverse complement

Expression of CNT30696190

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MELPKNFFPSQFLSFINSGRSLLFLEICISCFNQITISNSLLFLQKK

Sequence

>CNT30696190
TTTTTTTTTTTAATCTCCTTTTTTTATTTTACTCTTATTGAATCGCGGTAAAGTATTCTAATTCAATAAAAATTTCGCGGGCGAATATTTACTCTTTCCT
GTCTTATTTGTTAATTCATAACCTTATCAAATAAGACAATTTTTTTGGTTTGTTCCGCCATCCCACCCAATGAAGTATTGGGATTCTTTTCAAGAAAATC
CTATCCAGTCATAGGTTCTGTCGTTCCCACTGCTTCTCCTTTAATGGTTAGGTTTGAATCTCGCAATGGAGCTTCCAAAAAATTTCTTTCCGAGTCAATT
TCTCAGTTTTATTAACTCGGGACGCTCTTTGTTATTCCTTGAAATTTGTATTTCTTGTTTCAATCAAATTACGATTTCGAATTCTCTTTTATTTTTACAA
AAAAAA