Detailed information on CNT30696010


BLAST search results

BLAST vs Swiss-Prot:
sp|P12459|TBB1_SOYBN, E-value = 6e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677823Oryza sativaSetaria viridis26.8128.1486.4974forward
CNT30522590Oryza sativaSetaria italica30.435.0286.984forward
CNT30397469Oryza sativaTriticum turgidum30.437.1186.984forward
CNT30684516Oryza sativaTriticum urartu28.2629.6687.1878forward
CNT30368464Oryza sativaSorghum bicolor30.810.3485.8885forward

Expression of CNT30696010

Peptides detected in this lncRNA

>peptide 1 (34 aa)
PSVREKLSVNITIWVLLPEYGANTRMAESFHPPR*

Sequence

>CNT30696010
ACCTTCGGTGAGGGAAAAACTAAGTGTCAACATCACTATCTGGGTACTCCTTCCTGAGTACGGTGCCAATACCAGAATGGCAGAATCATTTCATCCTCCC
AGATGAAATGAAATCCTTTGCATACCTTGGAGGCAATCGCAGTTTTCGACCTCCTTGCGGACGACGTGCATGGAATCGATGAGCTCGGCGCCCTCGTTGT
AGACGTGTAGTGCTCAGACAGCCCAGTTGATTCCACCCGCAACAGATTGGTGGAAGACGAAGTTGTCGGGGTTGAA