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Detailed information on CNT30695991


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT001126, E-value = 9e-173

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553947Oryza sativaOryza glaberrima44.754.5784.19430forward
CNT30370360Oryza sativaOryza glumipatula35.0373.5892.28337forward

Expression of CNT30695991

Peptides detected in this lncRNA

>peptide 1 (82 aa)
LVSFRGRTEVPRLGFAGNGGAISGAGEISPRLRRNPPISGNVTASNRNTVALWTPLLRLCSSPGFHSSLQAEPLRHELHQHL*

>peptide 2 (66 aa)
PCLVSRKNRGTPPRIRRERRRHLRRRRDKSSTPSQSANLRERDRVKSEHRRALDAAASPLLVARLP*

Sequence

>CNT30695991
CCTTGTCTCGTTTCGCGGAAGAACCGAGGTACCCCGCCTCGGATTCGCCGGGAACGGAGGCGCCATCTCCGGCGCCGGCGAGATAAGTCCTCGACTCCGT
CGCAATCCGCCAATCTCCGGGAACGTGACCGCGTCAAATCGGAACACCGTCGCGCTCTGGACGCCGCTGCTTCGCCTTTGCTCGTCGCCCGGCTTCCATA
GTTCGTTACAGGCTGAGCCACTTCGTCACGAGCTTCATCAACACCTGTAGATCAAGAATCCCGAAGGAATCGACGCGAGGTGGACCACAGTGGGAGATCC
TCTTCTTCTTCTCCAATCCCAGCCGCCGACGCCATTCCTTTCTTTCTCCTTCTCTGAAGCCTGGGGATACGCCGTCGACGACGACCGTAGCAGCCGCGCC
GTCGCCGAACCAGTACACCGTCGCCAAGACTTCGCTGAGCTGCGTTTGCTTCTTGAATTGGTTGCAGGTGAGATCACTCCTGTGGAGGATGATTTCGTTG
GGGAAGTTTCTTTCTTCCAGGATGGTTCTTACTAGGGTCTATCCTAGTCGGTTGCATGAAAGATCTTTTGGGTAGAAGATGCTTCCGCGAACCTATCTAT
TCAGCCAATCGGCCATGTGTATCTAAGTTATAAGTTGTATGATCCTAACTAAAACTTAGAACTTAGAACTCCCTATGTTGAGATATCATGTGCTTGGATG
AAAGTGTTTAGTGTGTTCCTTTTGTTAGGGACATATTAAACATGAGTATGAGTTAAAGATATTTGAGATGTTGTGGATCTTTAGCCATTTTTGTCAAGTC
TCCTGATTGTGTAACACATCTGGTCGCCACCTTCGAGTGGTTTGACGGGCACATCTCAGGCTGAAGTTGACTGGCAGGCTAAAGGCCCGGCAATGTCTCA
CATATTTTTCTCTCGGAGCGTCGAATGTCTTAATATGTTTGATGGAAGAATTGTGATTAGCT