Detailed information on CNT30695986


BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 4e-98

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522082Oryza sativaSetaria italica60.4768.6986.93566forward
CNT30188325Oryza sativaSecale cereale38.7842.6193.11363forward
CNT30300806Oryza sativaTriticum aestivum38.7844.4392.56363forward
CNT30224983Oryza sativaHordeum vulgare25.4339.0295.8238forward
CNT30394515Oryza sativaTriticum turgidum38.0343.3193.54356forward
CNT30589400Oryza sativaMusa acuminata38.4652.6390.28360forward
CNT30441097Oryza sativaAegilops tauschii29.8146.8994.98279forward
CNT30251696Oryza sativaAvena sativa38.5741.3591.41361forward
CNT30669194Oryza sativaTriticum dicoccoides60.5858.8287.3567forward
CNT30129910Oryza sativaCorymbia citriodora32.0547.6293.33300forward
CNT30685532Oryza sativaTriticum urartu33.0132.9494.82309forward
CNT30721767Oryza sativaTriticum spelta25.4331.6996.22238forward
CNT30103279Oryza sativaOryza rufipogon74.6857.72100699forward

Expression of CNT30695986

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MVIRASPKSAEEVDGAARAITGEESAMVAAAIDAVSCES*

>peptide 2 (37 aa)
CTQHQLDHHLVALNPSSPTQRQRTRWPQIHPTTINHC*

>peptide 3 (36 aa)
MRYPSTAPMSTTCTAQMARMLCAWIRLGLPRSASPP*

>peptide 4 (33 aa)
YTTPTRSSSRRTKPIFPNPKTTNSLATNPSNHN*

>peptide 5 (43 aa)
MAWTKKPNMENMARRPFLISFTLSSANASGSSARPSGSKAPPG*

Sequence

>CNT30695986
TGTACACAACACCAACTCGATCATCATCTCGTCGCACTAAACCCATCTTCCCCAACCCAAAGACAACGAACTCGCTGGCCACAAATCCATCCAACCACAA
TTAACCACTGCTAAGCTACGGTCCCCCACTTCACTTGCCGGGGACGAAGTTGGTGGCGTACGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCG
GCGAGGTTCTCGAGGGGGCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTCACCT
TGAGCTCCGCGAACGCCTCGGGGTCATCGGCGAGGCCGAGCGGGTCGAAGGCGCCGCCGGGGTAGAGCGGGTCGACGACCTCGCCGAGCGGCCCGCCGGC
GATGCGGTACCCCTCGACGGCGCCCATGAGCACCACCTGCACCGCCCAGATGGCGAGGATGCTCTGCGCGTGGATCAGGCTCGGGTTGCCGAGATCTGCG
AGCCCGCCTTGAACCACACGGCCTCGCCGAACTTGACGCCGTTCCGGGCGAGGAGCTCCGGGAAGACGCAGCCGAGCGCGCCCAGCATCGCCCACCGGGA
GTGGATCACCTCCAGCTCCCGGTTCTTGGCGAACGTCTCCGGGTCGGCGGAGAGCCCCGCGGTGTCCCACCCGTAGTCGCCCGGGAACTCGCCGGTGAGC
GGGCCGAGGTAGAGGACGCGGTCGGCGCCGTACCACGGGCTCCCCGACGACGCCGCCGGCTTGGGCTTCGCGGCGGTCTTGCGCATGGTGATCCGCGCCT
CGCCGAAGAGCGCGGAGGAGGTCGACGGCGCCGCGCGGGCCATCACCGGGGAGGAGAGCGCCATGGTGGCCGCGGCCATTGATGCAGTGAGCTGTGAGAG
CTGAGAGAGATGGCGATGAGCGAGCGAGTGTGAGTT