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Detailed information on CNT30695851


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30103483Oryza sativaOryza rufipogon23.2538.78100159forward

Expression of CNT30695851

Peptides detected in this lncRNA

>peptide 1 (96 aa)
MRWSADLISLDLSRTRRRPWGREPELRPWGREPEPGEEWPGPEPGALTPAQASAAASPEEGTPWERASGWPPGPELMRRRRASPWPRPRSGSAPLE*

>peptide 2 (49 aa)
MPKKMEEKKDRERNKINSSTPPPQMKKEKEEIRRGGGGMVGPSDGRVIN*

Sequence

>CNT30695851
GGGTAATGGAGAAAGATTAAAAAAATGGGGTGAGTGCGCTTGGGGAAAATAAAAGAGAGTAAAAAGTCCAAAGTGAAAGGAATATTGAACAACGGGAGAT
GTATAGTACAATGGAGGAGCAGCACAACACCAACCCAACCAACCAATCTGTCCACGCCACACGCCCACACACCTACTGAATCGAATGCCTGAATGGAAAA
AAAATGCCCAAAAAAATGGAAGAAAAAAAAGATAGAGAGAGAAATAAAATAAACAGCTCAACACCACCACCACAGATGAAGAAGGAAAAGGAGGAGATCA
GGAGAGGAGGAGGAGGAATGGTGGGTCCCTCTGATGGACGGGTAATAAATTAATGAGGTGGTCGGCGGATCTCATCAGCCTCGATCTCAGTAGAACGCGG
CGGCGGCCTTGGGGGCGGGAGCCGGAGCTGAGGCCTTGGGGGCGGGAGCCGGAGCCGGGGGAGGAGTGGCCGGGGCCTGAGCCGGGGGCGCTGACACCGG
CGCAGGCGTCGGCGGCGGCGTCGCCGGAGGAGGGGACGCCTTGGGAGCGGGCGTCGGGGTGGCCGCCGGGGCCTGAGCTGATGCGGCGGCGAAGAGCATC
GCCATGGCCAAGGCCACGATCTGGAAGCGCGCCATTGGAGTAGAGTGAGAGAGCTAGCTGGTGCTAGGGTTTGGGAGGAGAGTG