Detailed information on CNT30695815


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554727Oryza sativaOryza glaberrima21.656.569850forward
CNT30596713Oryza sativaOryza meridionalis32.0313.4897.374forward
CNT30370891Oryza sativaOryza glumipatula46.3211.57100107forward
CNT30102963Oryza sativaOryza rufipogon21.213.9897.9649forward

Expression of CNT30695815

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MNKMKMELINSRRRSSRRRPAPALPARPPPRPPPALSPSPSCSSSSSPPQPPAPHL

Sequence

>CNT30695815
TATTCGGTTATATTAGGATGAGTTTGAACTTTGAAGTGCAGGGATAGGCGTGGTGTGGTTGGATGAATAAAATGAAAATGGAATTAATTAATAGTCGTCG
TCGTAGCTCGCGCCGCCGGCCAGCGCCAGCCCTCCCAGCACGCCCGCCGCCGCGCCCACCGCCAGCCCTGTCCCCATCCCCATCTTGCTCTTCTTCTTCG
TCTCCTCCACAACCACCGGCGCCCCACCTGC