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Detailed information on CNT30695776


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370828Oryza sativaOryza glumipatula45.8862.4398.2334forward

Expression of CNT30695776

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MRVAREHVLPPTSQPIDHRSTSAPFSLSSPFSRLSVKREEEEDEKKRKKRKGNRH*

>peptide 2 (52 aa)
LKALSLLSPSHNRLLPPPPDLPHQSSTNQILAPLASPRRGDSIFPLSPLPPP*

>peptide 3 (29 aa)
MFCRRRRSLSTTGAPAPLSPSLLPSLGSL*

Sequence

>CNT30695776
GCTAAAAGCTCTTTCCCTTCTCTCTCCCAGCCATAACCGGCTATTGCCGCCACCGCCCGATCTCCCTCACCAGAGCTCCACTAACCAAATCCTCGCGCCA
TTGGCTTCGCCTCGACGAGGTGATTCCATTTTTCCCCTTTCCCCTCTCCCTCCACCTTGAGATAAACCGCCACCACCACCTTCTCTTATCGCCGGAGTTG
AGCTCCTGCCGTCGCTGTTCCGGCCATCTCCCTCTCCACCTAGCTAGCTACCACCCTCCCCGGATGCGCGTCGCTCGGGAACATGTTTTGCCGCCGACGT
CGCAGCCTATCGACCACCGGAGCACCAGCGCCCCTTTCTCCCTCTCTTCTCCCTTCTCTCGGCTCTCTGTGAAGCGGGAGGAAGAAGAAGACGAGAAGAA
GAGAAAGAAGAGAAAAGGGAATAGGCACTGACAGAGTCATTTTGGAGTTCTTGCCGAAGCTGGAAGTTCAATCATATAAGTTAATCTCATTTTAACTTAG
TTCTCAAGTATAGATTAGATAGATGGTTTAACTCTATAGCAAAACACTAGAGTTATGTCATCGTATAGCTTCTGCTGTAATAGTTAGCCACAAGTTTGTA
AATACCCTATTATTTTATGTAAAGGAATCTCCTTTAAAACCTTGATCAAATGTATGCAATGAAGATCCAGATCGTTGAACCTATATCAATCTACTGATCC
AGGGCTTGATACAGTCTAAACATGTCGG