Detailed information on CNT30695723


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554718Oryza sativaOryza glaberrima61.631.3499.57231forward
CNT30106324Oryza sativaOryza longistaminata53.0712.4299.5199forward

Expression of CNT30695723

Peptides detected in this lncRNA

>peptide 1 (36 aa)
HNSFCCTSSQCKTYLHDGQILAKLQACSYEEIATFK*

>peptide 2 (65 aa)
TTVSAAPLPSVRPISMMDKFLQSCKPAVMRKLQLSSRLLHVAEQDISSKGVVNMPKRGGCIIKVE*

Sequence

>CNT30695723
TCACAACAGTTTCTGCTGCACCTCTTCCCAGTGTAAGACCTATCTCCATGATGGACAAATTCTTGCAAAGTTGCAAGCCTGCAGTTATGAGGAAATTGCA
ACTTTCAAGTAGGCTACTGCATGTAGCAGAACAAGATATATCTTCTAAGGGAGTGGTCAATATGCCCAAAAGAGGTGGATGCATAATTAAGGTTGAATGA
GTGATGGGTGGTTTAGTGCTTAAATTAAAAGGTGAAGAGACCAGTAGTCGCTAGTTTCTCTTTTCAGTTCCTTTCTTTTATCATCTAATAAAATAAGTGA
TATAAAACTCCCAAGCAAAAGTGAATAATTGGACCACCTTTTTTGTATTCAGACGAAATAGCTGGTCTGCTAACT