« Back to Oryza sativa search


Detailed information on CNT30695706


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370810Oryza sativaOryza glumipatula97.0198.5798551forward

Expression of CNT30695706

Peptides detected in this lncRNA

>peptide 1 (33 aa)
LHCLFFLFFLKLSSHLTSPPQIPSNSPRSIPAC*

>peptide 2 (33 aa)
MHGELRDIEIGEESGGFSLHGCSSNMTLFPSIC*

Sequence

>CNT30695706
TCTTCACTGCTTGTTCTTTCTTTTCTTCCTCAAGCTGAGCTCTCATCTCACTTCTCCTCCCCAAATCCCATCCAATAGCCCAAGATCAATCCCTGCATGT
TAGATCACAACAATCCCCATCATCCAAGCTTTCCATCCATCCCAACATCTTGCACATGCATGGAGAGTTGAGAGATATCGAAATAGGAGAAGAGAGTGGT
GGTTTCAGCCTGCATGGTTGCAGCAGCAATATGACTTTGTTTCCCTCCATTTGCTAGGAGGTGGCTGCAGCTCATCCGGTGTTAATCTCTTTTGATTTCA
GTTGAAGCAGCCCTAGGCAACGTCTCTTACCGTCAGCCCGAGGCCTTGCTCCGTCTCTTGCCATCAGCCCGAGGCCTTAGCCTCGCACGACCCTACGTCC
AGGTTGCTGCCATGTGAGCGAAGTCTGGTGGAAGTTGGAGAAAAGGGGGAGTGAAAATAGAAATCGATTTCTGAGATAGCTTTTGAGCTGAAAGAGATTC
GGAGATTCCGGAGAGTAACGAGTCATATCCCGAGGAGGATAGTGACTACCCTCAGCAGCAAGGCAAGC