Detailed information on CNT30695581


BLAST search results

BLAST vs Swiss-Prot:
sp|P10978|POLX_TOBAC, E-value = 8e-06

BLAST vs NONCODE:
NONORUT006276, E-value = 3e-74

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522221Oryza sativaSetaria italica53.3115.7884.67137forward
CNT30365232Oryza sativaSorghum bicolor37.3511.9686.4696reverse complement

Expression of CNT30695581

Peptides detected in this lncRNA

>peptide 1 (42 aa)
CFVCGKSGHWAKDCPERKDRKSANMIISEGGGTSRSGEVPPC*

>peptide 2 (41 aa)
MGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVS

Sequence

>CNT30695581
ACTGCTTTGTGTGTGGCAAGTCTGGGCATTGGGCCAAGGACTGTCCTGAGCGCAAAGACAGGAAGTCTGCCAACATGATCATTAGCGAGGGCGGAGGAAC
ATCGAGGTCGGGAGAGGTTCCTCCTTGTTGATGGGAAACGGGTCGCTTGCGGCTGTTCATGGTGTTGGTACGGTCGATCTGAAGTTTACTTCGGGAAAGA
CCGTGCAGCTGAAGAACGTGCAGCATGTCCCTTCAATAAAGAAGAATCTAGTTAGCG