Detailed information on CNT30695565


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002513, E-value = 8e-130

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30576173Oryza sativaOryza barthii36.9459.5594.08321forward

Expression of CNT30695565

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MCVPTTDPGIGTDKHRRFPIYKIGGRQAASMPLCCSAASS*

>peptide 2 (61 aa)
MPLLLLLPWINSGCRCDLRTCGRTPARSPPSSTSASLPSPHHGIEHRRFAASRRVLKRSPC*

>peptide 3 (67 aa)
MASLPCSFACGEREMTCGAYVGPTLFFLCSRYVGPTIFRLIIFCVANMWAHDYYYYYYYYYYYYYYY*

>peptide 4 (57 aa)
PPLSAFPLECISSSTLCACLHSHCLKPEPVLTTAGAVASGCLCCCCYLGSTPGAVVT*

Sequence

>CNT30695565
CCCACCTCTCTCTGCCTTTCCTCTCGAATGCATTTCATCGAGCACCTTGTGTGCGTGCCTCCATAGCCATTGCTTGAAGCCGGAGCCGGTGCTGACGACC
GCGGGAGCTGTGGCTTCGGGATGCCTCTGCTGCTGCTGCTACCTTGGATCAACTCCGGGTGCCGTTGTGACCTGAGGACCTGCGGTCGTACACCTGCGCG
CTCGCCGCCGTCGTCCACCTCTGCTTCACTGCCGTCTCCCCACCACGGCATCGAACATCGCCGTTTCGCTGCCTCTCGCAGAGTATTGAAGAGAAGCCCT
TGTTAGTACGCTTGCGTACCTAACAAGATAATCGGAGTGCGGTTCCGTTCTAGGTCTCGTTCCCCAGTCGACTGCTTGTGGCATGTCAACCGAGCCCTTG
TATTATTTTGTCTTCCGCTATTGTTTCTCTGATAGTTGTTGGCCTGCTTGGCCCTAATATAAACATTTAACTCTCTTAGCCTGAATTCATTCGTGATATG
TTGTGATTCGGTTATATATGTGTGTACCAACTACTGATCCAGGGATTGGTACTGATAAACACAGAAGATTTCCGATTTACAAAATCGGAGGTCGACAGGC
GGCGTCCATGCCGTTGTGTTGCTCCGCTGCTAGCAGCTAGCCGCACGTCCCCATGGCCTCCCTCCCGTGTAGTTTCGCGTGTGGGGAGAGGGAGATGACA
TGTGGGGCCTACGTGGGCCCCACCTTATTTTTTTTGTGTAGCAGATATGTGGGCCCCACCATTTTTAGATTAATTATTTTTTGTGTGGCTAACATGTGGG
CCCATGATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGAGATATAGTTGCCA