Detailed information on CNT30695531


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6YZ97|GL810_ORYSJ, E-value = 6e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30401447Oryza sativaTriticum turgidum41.8536.8285.2695forward
CNT30241012Oryza sativaAvena sativa32.66.2885.1474forward

Expression of CNT30695531

Peptides detected in this lncRNA

>peptide 1 (50 aa)
GECISATQKSCRGLGSEAMACHETNARRAARRQMDGEAIYLALVFCSLLC*

>peptide 2 (44 aa)
MRPTQEEQRGGRWMVKPFTWLWFSALFSAELFAVSLVAEKLASC*

Sequence

>CNT30695531
AGGTGAGTGCATATCGGCAACGCAGAAATCCTGCAGAGGGCTAGGATCAGAGGCGATGGCCTGCCATGAGACCAACGCAAGAAGAGCAGCGAGGAGGCAG
ATGGATGGTGAAGCCATTTACTTGGCTTTGGTTTTCTGCTCTCTTCTCTGCTGAATTATTTGCTGTTTCTCTGGTGGCTGAGAAGCTAGCTAGCTGCTAG
CTAACTGCTTGTGAGTGCATATCGGCA