Detailed information on CNT3069547


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 7e-112

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-119

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616003Quercus suberSesamum indicum94.6529.1782.72654forward
CNT30727227Quercus suberCorchorus capsularis99.1359.6284.67685forward
CNT3096790Quercus suberSolanum tuberosum94.9373.0584.45656forward
CNT30605497Quercus suberGossypium raimondii99.2890.583.24686forward
CNT30418079Quercus suberPapaver somniferum98.752.782.99682forward
CNT3032610Quercus suberTheobroma cacao102.7587.7681.83710forward
CNT3026462Quercus suberPopulus trichocarpa10076.2784.23691forward
CNT30120072Quercus suberCitrus clementina99.2858.9983.82686forward

Expression of CNT3069547

Peptides detected in this lncRNA

>peptide 1 (96 aa)
SLETTTEAKDKVQSRLLLDIVISQSPSIFKLFACKNKPLLVWGNSLLVLNLCFHIINCIRALNLQIIVLPVKVLTKICIPPLSRSTRWRVDSFWIL*

>peptide 2 (40 aa)
MVSELSTSKVMVLPVKVFTKICIPPRSRSTRWRVDSFWML*

Sequence

>CNT3069547
AAGCTTAGAAACCACCACGGAGGCGAAGGACAAGGTGCAGAGTAGACTCCTTTTGGATATTGTAATCAGCCAGAGTCCTTCCATCTTCAAGCTGTTTGCC
TGCAAAAATAAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATTGTATCAGAGCTCTCAACCTCCAAATAA
TTGTTTTGCCAGTCAAGGTCTTAACAAAAATTTGCATTCCACCTCTAAGCCGGAGCACCAGGTGGAGGGTGGATTCCTTTTGGATATTGTAGTCGGCTAG
CGTCCGACCATCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGAATTTTGGCTTTGACATTATCAATG
GTGTCGGAGCTCTCAACTTCCAAAGTAATGGTTTTACCGGTCAAGGTCTTCACAAAAATTTGCATTCCACCTCGAAGCCGGAGCACAAGGTGGAGGGTGG
ATTCCTTTTGGATGTTGTAGTCTGCGAGGGTGCGACCATCTTCGAGCTGCTTTCCGGCAAAGATTAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTC
TTGGATCTTAGCTTTGACATTGTCGATGGTGTCTGAGCTTTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGTGTCTTAACAAAGATCTGC