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Detailed information on CNT30695326


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 3e-49

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30117448Oryza sativaOryza nivara47.0146.52100314forward

Expression of CNT30695326

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MSKTFLPVNLTSMGLTFLPMLRKFWPTPCLPALGPSRMMAAPPVGISNTCSLGDVHVMT*

>peptide 2 (32 aa)
MAMVVGGGERRVPCGGFDSSGVVWRREISEME*

Sequence

>CNT30695326
ATCCCACCATCGATCGATTACACCATCATCAATAACTGAAGAGCAGCCTGACAGATGATTAAAATTACATGTCCATCCACCCAAAACACAAGTAATTAAT
AGGTCGATTATGAGAGAAGAAGAAGAAGAAGAAGAAGTCTAGATGTCGAAGACGTTCTTGCCGGTGAACTTGACCTCGATGGGGCTGACGTTCTTGCCGA
TGCTGCGGAAGTTCTGGCCGACGCCCTGCCTGCCGGCGTTGGGGCCCTCGCGCATGATGGCGGCGCCGCCCGTGGGCATCTCGAACACCTGCTCCTTGGG
CGACGTCCATGTGATGACGTAGAACTCCTCCACCTGCGCCTTCCGGAGGAGTCCCCCCGTGCTCCCGCCGAAGATCGGGGACGGCGTGTTGGGGTCCAGC
TGCGGCGGCACGAACCCCGCGGGGGCTGGCTTCTTCTCCTCCGTCGCCGCCGCGGCGGGCTGATCCTCCGCCGCCGCTCTGAGGGAGGTGGGTGCCCTCG
AGGAGGTGGCACTTGGCGGCGGAGGCTTGCGTGGCCATGGCCATGGTGGTCGGAGGAGGAGAGAGGAGGGTACCGTGTGGTGGATTCGATTCGAGTGGTG
TGGTGTGGAGGAGAGAGATATCGGAGATGGAGTAAGAAGAAGAGAGGGGAAATGGGTGAGGAAGTGGA