Detailed information on CNT30695265


BLAST search results

BLAST vs Swiss-Prot:
sp|P84563|PSAD_POPEU, E-value = 9e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677834Oryza sativaSetaria viridis26.4138.6192.9183forward
CNT30525887Oryza sativaPhaseolus vulgaris13.4224.8786.0293forward
CNT30299761Oryza sativaTriticum aestivum46.7583.2993.52324forward
CNT30395284Oryza sativaTriticum turgidum58.358.7292.57404forward
CNT30665641Oryza sativaTriticum dicoccoides58.353.0292.57404forward
CNT30596768Oryza sativaOryza meridionalis59.0252.2395.6409forward
CNT30358483Oryza sativaLactuca sativa20.7822.0283.33144forward
CNT3035037Oryza sativaCucumis melo13.7131.6786.3295forward
CNT30148465Oryza sativaBrachypodium distachyon60.1753.7485.37417forward
CNT30579413Oryza sativaEchinochloa crusgalli57.2942.7892.44397forward

Expression of CNT30695265

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSKTFLPVNLTSMGLTFLPMLRKFWPTPCLPALTFSG*

>peptide 2 (32 aa)
MAMVVGGGERRVPCGGFDSSGVVWRREISEME*

Sequence

>CNT30695265
TACATGTCCATCCACCCAAAACACAAGTAATTAATAGGTCGATTATGAGAGAAGAAGAAGAAGAAGAAGAAGTCTAGATGTCGAAGACGTTCTTGCCGGT
GAACTTGACCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGGCCGACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTAGACGCCGTCC
TTGGGGTGGAGGTACTGCACCTCGCCATTGGGGAAGACGCGGTAGAACTGGTAGTTGATCTTGTACTTGGAGCGGAGCCTGCAGGTTGGGGCCCTCGCGC
ATGATGGCGGCGCCGCCCGTGGGCATCTCGAACACCTGCTCCTTGGGCGACGTCCATGTGATGACGTAGAACTCCTCCACCTGCGCCTTCCGGAGGAGTC
CCCCCGTGCTCCCGCCGAAGATCGGGGACGGCGTGTTGGGGTCCAGCTGCGGCGGCACGAACCCCGCGGGGGCTGGCTTCTTCTCCTCCGTCGCCGCCGC
GGCGGGCTGATCCTCCGCCGCCGCTCTGAGGGAGGTGGCACTTGGCGGCGGAGGCTTGCGTGGCCATGGCCATGGTGGTCGGAGGAGGAGAGAGGAGGGT
ACCGTGTGGTGGATTCGATTCGAGTGGTGTGGTGTGGAGGAGAGAGATATCGGAGATGGAGTAAGAAGAAGAGAGGGGAAATGGGTGAGGAAG