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Detailed information on CNT30695219


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 2e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522020Oryza sativaSetaria italica64.0269.8391.84331forward
CNT30651207Oryza sativaRosa chinensis21.0816.182.57109forward
CNT30579660Oryza sativaEchinochloa crusgalli63.4454.394.82328forward

Expression of CNT30695219

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSKTFLPVNLTSMGLTFLPMLRKFWPTPCLPALTFSG*

>peptide 2 (48 aa)
MMAARRWHLAAEACVAMAMVVGGGERRVPCGGFDSSGVVWRREISEME*

Sequence

>CNT30695219
TACATGTCCATCCACCCAAAACACAAGTAATTAATAGGTCGATTATGAGAGAAGAAGAAGAAGAAGAAGAAGTCTAGATGTCGAAGACGTTCTTGCCGGT
GAACTTGACCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGGCCGACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTAGACGCCGTCC
TTGGGGTGGAGGTACTGCACCTCGCCATTGGGGAAGACGCGGTAGAACTGGTAGTTGATCTTGTACTTGGAGCGGAGCCTGGTGCCCAGGGCCAGGCACT
GCTCCTTCCTGGCCAGCTTCAGCAGGTTGGGGCCCTCGCGCATGATGGCGGCGAGGAGGTGGCACTTGGCGGCGGAGGCTTGCGTGGCCATGGCCATGGT
GGTCGGAGGAGGAGAGAGGAGGGTACCGTGTGGTGGATTCGATTCGAGTGGTGTGGTGTGGAGGAGAGAGATATCGGAGATGGAGTAAGAAGAAGAGAGG
GGAAATGGGTGAGGAAG