Detailed information on CNT30695199


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30102531Oryza sativaOryza rufipogon63.6631.4493.55310forward

Expression of CNT30695199

Peptides detected in this lncRNA

>peptide 1 (98 aa)
MGKRRGEEGMGTPGREAAQRREGSDGGVVDEGEQERRSAAMQSSGVSRWGCRRWRRCGGAAMGAARCGRRGGGGRVGNRPRRRRRRGRHTGEPTMTRS*

>peptide 2 (67 aa)
GKSLCSATPTCGATAIDGDLPGRRLARRWVPLRGCGVRRAAGAVNGEATWRGRDGDAGEGGSAAKRG*

>peptide 3 (69 aa)
MGVPTVEALWGRGDGGGAMWEAWWGRQSREPPPAAAAAREAHRGTDDDEELRRQGRRGRGAWWGRNEESG

>peptide 4 (46 aa)
MRASRSGGRRRCRAQGCRDGGADGGGVVGARRWGRRDVGGVVGEAE*

Sequence

>CNT30695199
GGGAAATCCCTCTGCAGTGCAACGCCGACCTGCGGGGCGACGGCGATTGACGGCGACCTGCCGGGACGGCGGTTAGCTCGCCGGTGGGTTCCGCTGCGGG
GTTGCGGCGTGAGGCGTGCAGCGGGGGCGGTGAATGGGGAAGCGACGTGGCGAGGAAGGGATGGGGACGCCGGGGAGGGAGGCAGCGCAGCGAAGAGAGG
GTAGTGACGGCGGCGTCGTAGATGAGGGCGAGCAGGAGCGGCGGTCGGCGGCGATGCAGAGCTCAGGGGTGTCGCGATGGGGGTGCCGACGGTGGAGGCG
TTGTGGGGGCGCGGCGATGGGGGCGGCGCGATGTGGGAGGCGTGGTGGGGGAGGCAGAGTAGGGAACCGCCCCCGGCGGCGGCGGCGGCGAGGGAGGCAC
ACAGGGGAACCGACGATGACGAGGAGTTGAGGAGGCAGGGGAGGCGCGGACGCGGGGCGTGGTGGGGGCGCAACGAAGAGAGTGGGG