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Detailed information on CNT30695136


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554262Oryza sativaOryza glaberrima99.2592.3399.721059forward
CNT30577202Oryza sativaOryza barthii100.2892.6499.441070forward

Expression of CNT30695136

Peptides detected in this lncRNA

>peptide 1 (66 aa)
DVTARRSQSPRSGLCKEHASKKNNAVAYAKSTQVILVGYPPRRTTVAQVNASVPRALPTLSTEATT*

>peptide 2 (49 aa)
MPARLRVVGNQETADTRAPVNPMMSQQQLRLLRMRSSLYLYYSPDRAGA*

>peptide 3 (34 aa)
MISSLRGTKCTLPFLKLRVRFLLKEYTEFCMYKA*

Sequence

>CNT30695136
GATGTGACCGCTCGCAGGTCGCAGAGCCCCCGCTCTGGCCTCTGCAAGGAGCACGCTTCTAAGAAGAACAATGCTGTGGCGTACGCAAAGTCCACACAGG
TGATACTAGTTGGGTATCCTCCAAGGAGGACAACGGTGGCCCAGGTGAACGCCAGTGTGCCGAGGGCGTTGCCCACCCTCTCAACGGAGGCAACAACTTG
AACAAAGCAATTCAGCTGCTCTTCTGGCATCGCGCTATGCCAGCTCGCCTCAGGGTTGTAGGCAATCAGGAGACAGCTGACACGAGAGCACCGGTTAATC
CAATGATGAGTCAGCAGCAACTTCGATTACTACGCATGCGAAGTTCCCTTTATTTGTATTATTCTCCCGATAGAGCTGGAGCATAGTTTTCTTGACTGAC
ATGCCAATGTTCATCTTCTAGGAAAATGTCACAGCTGATGGCATCTTCCTCTCTATCTACCTAAGAGTTGTACGCATTACAGAAAAAAAACAAACGGAAG
AGAGTAAACTCCAAACTCCAGAGGTGTTGGATTTGGTGATTGGTCATTGGTTGCGGCGGCGCCGCCGGCCTACCGGGCGTGGAACACCGTACGGCCGGAG
AATGATTTCCTCGTTGCGCGGCACGAAATGTACTCTTCCATTCCTGAAGCTACGGGTACGGTTTCTGCTTAAAGAATACACTGAATTCTGCATGTATAAA
GCCTGAACCCGTAGGTCTTCAGCTACCCGGCAGTGTTCAGATAAGCAACCCGGATGATTGTTTTGGCTTCTGGATTTATCAAATGAAGTCATTTTGCCTG
TTGACTCAGACATAGGATTGCTTGACGTACCCATGATCAAGTAACATGTATATATAAAATCCGAGAAATGTTATGTGATCTAGTCTAAGAGAATGGTTGA
ATGAAGAGGATCCTCTTAATTTGGAGATTAAAAACAAGTTGATTGAGATGCAATCTGAGTGTACGAGAAGCAGTTATAGAGTTGGCAATGGTATGTAAAC
CTCTGAAAATGACTGTTGCGTGAAACGGTGAAAGGTTGTCTATAAAGATTTTATTTACTGATTATTG