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Detailed information on CNT30695120


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30577010Oryza sativaOryza barthii69.274.3597400forward

Expression of CNT30695120

Peptides detected in this lncRNA

>peptide 1 (96 aa)
SRQGVGAGLGRAARCAAAQRRGRAVRRRGAEARRGGGRPGRGRQAAVRGSEPGTGREDSRARKWIERGKERHWLHKRDLKSFWNRGSASAITHDEL*

>peptide 2 (93 aa)
QPAGGGGGARSRRALRGGAAARSRGAAARGRGTTRRWPARQRQAGGSERLRARHRQGGQQSKKMDRKRKGKALASQKRFEEFLEPGLCKRNYS*

>peptide 3 (47 aa)
AAGRGWGRGSVAPRAARRRSGAVARCGGAGQRHDAAVAGQAEAGRRQ*

Sequence

>CNT30695120
GCAGCCGGCAGGGGGTGGGGGCGGGGCTCGGTCGCGCCGCGCGCTGCGCGGCGGCGCAGCGGCGCGGTCGCGCGGTGCGGCGGCGCGGGGCAGAGGCACG
ACGCGGCGGTGGCCGGCCAGGCAGAGGCAGGCAGGCGGCAGTGAGAGGCTCAGAGCCAGGCACAGGCAGGGAGGACAGCAGAGCAAGAAAATGGATAGAA
AGAGGAAAGGAAAGGCATTGGCTTCACAAAAGAGATTTGAAGAGTTTTTGGAACCGGGGCTCTGCAAGCGCAATTACTCATGATGAATTGTGAACTTATG
ACTATTGCTTAATTGTTGCCATTGCCATGTTTGAGATTACGTGGGATAATATTGCGTCATATAATATAGTACATTGAGATTGTTTTTTCTCCCTTTCTTT
ACACTAGTCTATGGGTCACACTGTCAACACCACCACACCAAATTTTTTTTCCGTCCTCCGCCACTGAGCTCCACCACTTCTCGTGGGCGTTAATTCTTCT
TTGGGCAACACGTACTCTGTTTGGTTCCTCATTTTACATACTCGTTTTTAATTACCGTCGACTACGGTCGGTTGATTT