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Detailed information on CNT30695048


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30102773Oryza sativaOryza rufipogon69.9490.1899.26542forward
CNT30117136Oryza sativaOryza nivara17.9423.8899.28139forward

Expression of CNT30695048

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MLAMTLSTVLTPSGAAAMARQLVVPYVVWITTFSSGSVTCMPSNSSVTGGHATVVL*

Sequence

>CNT30695048
AATAACTTCTGTATTTTCAAACAACGGCCCAACTTCTCTTAAAACATCATGTTACTACATTAAAGCAAGGGATTAGCTGAATTAATCCAGCACCTAATTA
AACATCACAAACGTGCACATTTCACTTCACTTATCATCAGGATCTAATCAACGAACCAAACCCAGACTAAATAAACCACTGAAACATTCTTCACCTGAGA
AGCTAGCTCACTAAGCTACAAAGAATTGAAGCAGCAGCGAAAGTGAGACGGCGGCGGCGGTGCAGCTCTCGCGGGCGAAGCCGACGCGGCCGTTGGGCAC
GTCGAAGAGGACGCGGTGGTTCTGCTGCTGCATGCTGGCGATGACGTTGAGCACCGTGTTGACGCCGTCGGGCGCCGCCGCCATGGCCAGGCAGCTGGTG
GTGCCGTACGTGGTGTGGATCACCACGTTCTCCTCCGGCAGCGTCACCTGCATGCCGTCGAACAGCAGCGTCACCGGCGGCCACGCCACCGTGGTGTTGT
AGCACGTGTCGAACCCGCCGAGGGAGGACACGGCGGCGGCGCGTGAACATCGTCCCCGAGTCGAGCACCGTGCCGGCGCCCGTCGCCGGGTCGAACGCCA
GCGCGGACGCCGGGATCGACACCACCTTTTTCCCCACGCGGATGCCGGTCATGTTGACGTAGTAGAGCGACGAGCGGTGCGGGTTGGCGAGCAGCGGCGT
CGTCTTGATCCGCCGCGGCTGCCCGTTCCGGCCGAGCCGGAGCGTGCCGGAGAAGTTGAGCGACTTGAAGCTCGG