Detailed information on CNT30695044


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30576980Oryza sativaOryza barthii36.1737.3499.33149forward

Expression of CNT30695044

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MVATAIVANNNSNYTADERGDARETIDLEKQRTQAS*

>peptide 2 (29 aa)
PGLASYPVHTQVHECIVRTRVQCSLINLI*

Sequence

>CNT30695044
CCCGGCCTAGCTAGCTACCCAGTACATACGCAAGTACATGAATGTATTGTACGTACACGTGTACAGTGCAGCTTAATTAATTTAATTTAATTTAATTGAT
TAATTAGACGTTGACGAGCGGCGAGCCGGTGAGGAACTCGGTGAAGGCGAGCGCGACGAGCGCGGCAGCACGACGGCGAGGCGGGAAGCCAACCGCGGCG
CGGCCGGCGGCGACGACACCACGCCATGGCGCGCTACCAGCGGCGGCGGCGGCGAAGGAGGAGCTCAGCGCCATGGTAGCAACCGCCATTGTTGCTAATA
ATAACTCAAATTACACAGCAGATGAACGCGGAGACGCGCGCGAAACGATCGATCTGGAGAAGCAAAGAACTCAGGCGAGCTAGCTAGATCACTCTTTCTG
CTGCTGCTGTTG