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Detailed information on CNT30695043

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30102562	Oryza sativa	Oryza rufipogon	66.2	78.35	100	333	forward

Expression of CNT30695043

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MHGTTPVVIFVQPAGTNFLLNIGLLLAFCSLISFYLLLK*

>peptide 2 (48 aa)
RAQSNSFRSIETSWVELSPLKLRVELDRALSQDKLLQTQLLKLNLGVL*

>peptide 3 (51 aa)
MLYRPATQLSAMLGLCSAHPNACPPRTHEFGVNLGTSTKKSGEKGLEVAMM*

Sequence

>CNT30695043
CTAGAGCTCAGTCAAACAGTTTTAGGTCCATCGAAACAAGTTGGGTGGAGCTCTCTCCACTAAAACTGAGAGTGGAGCTGGATAGAGCTCTCTCACAAGA
TAAACTACTTCAGACTCAACTCCTTAAATTAAATTTAGGAGTCTTATAGCTATACCAAACATGCTCTACAGACCAGCAACTCAGCTCTCCGCGATGCTTG
GGCTCTGCTCTGCCCACCCAAACGCGTGCCCCCCACGCACACACGAATTCGGCGTGAATTTAGGCACAAGCACCAAGAAATCGGGGGAAAAAGGTTTGGA
AGTAGCAATGATGTGAACACAACCCAACAGACAGCTGCTGGTGATTGATTTGTCTCGAGCTGAACTGGTGCTAATCATGCACGGTACTACTCCAGTAGTG
ATTTTTGTACAGCCAGCTGGTACTAATTTCCTCCTAAACATAGGGTTGTTGTTAGCATTTTGTTCTCTCATCAGCTTCTACCTGCTCTTGAAATAAAAGT
AGG